Return to main results Retrieve Phyre Job Id

Job DescriptionP60785
Confidence93.24%DateThu Jan 5 12:07:11 GMT 2012
Rank434Aligned Residues101
% Identity16%Templatec3jvvA_
PDB info PDB header:atp binding proteinChain: A: PDB Molecule:twitching mobility protein; PDBTitle: crystal structure of p. aeruginosa pilt with bound amp-pcp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  NFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFS
Query Conservation 








 




 
 

  

 
          
    







                  








 

 
Alig confidence 





















...
















...............






















Template Conservation 



 
 








 


  ...
       








...............           
 
      
  
Template Sequence  LVLVTGPTGSGKSTTLAAMLDY. . . LNNTKYHHILTIEDPIE. . . . . . . . . . . . . . . FVHESKKCLVNQREVHRDTLGFS
Template Known Secondary structure 
STTS
...


SS

...............S



SSSBTTTBS
Template Predicted Secondary structure 




...








...............














Template SS confidence 















































































   125....130.........140...... ...150.........160... ......170.........180......
 
   86...90.........100.........110.........120.......
Predicted Secondary structure 











Query SS confidence 









































Query Sequence  YEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEVV
Query Conservation   

   
   








  

  

      
    

 
Alig confidence 







.











..


















Template Conservation    
  


.  



 




..
 

   

 

 




 
Template Sequence  EALRSALR. EDPDIILVGEMR. . DLETIRLALTAAETGHLVF
Template Known Secondary structure  TT.S

SS


..STT
Template Predicted Secondary structure  .







..




Template SS confidence 









































   187..190.... .....200...... ...210.........220.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions