Job Description P60785 Confidence 99.86% Date Thu Jan 5 12:07:11 GMT 2012 Rank 51 Aligned Residues 159 % Identity 20% Template c3ievA_ PDB info PDB header:nucleotide binding protein/rna Chain: A: PDB Molecule:gtp-binding protein era; PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.													.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		Y	V	A	I	V	G	K	P	N	V	G	K	S	T	L	L	N	N	L	L	G	T	K	V	S	I	I	S	P	K	A	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	M	R	V	L	G	V	K	N	I	P	.	.	.	.	N	E	A	Q	I	I	F	L	D	T	P	G	I	Y	E	P	K
Template Known Secondary structure								S	T	T	S	S										T	S			S				S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.			S									T	.	.	.	.	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.															.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
							81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.																																											.														.
Query SS confidence		.	.	.	.	.																																											.														.
Query Sequence		.	.	.	.	.	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	.	D	L	E	V	V	P	V	L	N	K	I	D	L	.	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I
Query Conservation		.	.	.	.	.																																											.														.
Alig confidence		.	.	.	.	.																																											.														.
Template Conservation
Template Sequence		K	S	D	V	L	G	H	S	M	V	E	I	A	K	Q	S	L	E	E	A	D	V	I	L	F	M	I	D	A	T	E	G	W	R	P	R	D	E	E	I	Y	Q	N	F	I	K	P	L	N	K	P	V	I	V	V	I	N	K	I	D	K	I	G	P	A	K	N	V	L	P	L	I	D	E	I	H	K	K	H	P
Template Known Secondary structure		T	T																			S								T	T	T	B	S												T	G	G	G											G	G	G	S	S	S	G	G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	T	E	I	V	P	I	S	A	L	K	G	A	N	L	D	E	L	V	K	T	I	L	K	Y	L	P	E
Template Known Secondary structure		T								B	T	T	T	T	B	S												S		B
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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