Job Description P60785 Confidence 98.24% Date Thu Jan 5 12:07:11 GMT 2012 Rank 297 Aligned Residues 134 % Identity 17% Template c3cx6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:guanine nucleotide-binding protein alpha-13 PDBTitle: crystal structure of pdzrhogef rgrgs domain in a complex2 with galpha-13 bound to gdp Resolution 2.50 Å

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		42	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																																													.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																																													.	.	.	.	.	.	.	.
Query Sequence		D	S	M	D	L	E	R	E	.	.	.	.	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	.	.	.	.	.	.	.	.
Query Conservation										.	.	.	.																																																													.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		D	Y	I	P	S	Q	Q	D	I	L	L	A	R	R	P	T	K	G	I	H	E	Y	D	F	E	I	K	.	.	.	.	.	N	V	P	F	K	M	V	D	V	G	G	L	R	S	E	R	K	R	W	F	E	C	F	D	S	V	T	S	I	L	F	L	V	S	S	S	E	F	D	Q	V	L	M	E	D	R	Q	T
Template Known Secondary structure		T																	S									T	.	.	.	.	.	T											S	T	T	T	G	G	G	G	G	G	G		T	T										T	T	G	G	G		B		S	S	S	T	T	S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
					110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.																				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.
Predicted Secondary structure		.	.	.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence		.	.	.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		.	.	.	A	Q	T	L	A	N	C	Y	T	A	M	E	.	.	.	.	M	D	L	E	V	V	P	V	L	N	K	I	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	.	.	.	.	A	V
Query Conservation		.	.	.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence		.	.	.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		N	R	L	T	E	S	L	N	I	F	E	T	I	V	N	N	R	V	F	S	N	V	S	I	I	L	F	L	N	K	T	D	L	L	E	E	K	V	Q	V	V	S	I	K	D	Y	F	L	E	F	E	G	D	P	H	C	L	R	D	V	Q	K	F	L	V	E	C	F	R	G	K	R	R	D	R	P	L	Y	H	H
Template Known Secondary structure		B														T		G	G	G	T	T	S																T	T	T			G	G	G	T		T	T			S		T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	T	A	I	N	T	E	N	I	R	L	V	F	R	D	V	K	D	T	I
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions