Job Description P60785 Confidence 99.17% Date Thu Jan 5 12:07:11 GMT 2012 Rank 208 Aligned Residues 157 % Identity 16% Template c3cbqA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:gtp-binding protein rem 2; PDBTitle: crystal structure of the human rem2 gtpase with bound gdp Resolution 1.82 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	M	L	V	G	E	S	G	V	G	K	S	T	L	A	G	T	F	G	G	L	Q	G	D	S	A	H	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	P	E	D	T	Y	E	R	R	I	M	V	D	K	E	E	V	T	L	V	V	Y	D	I	W	E	Q	G	D	A	G	G
Template Known Secondary structure								S	T	T	S	S								T							G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		T	T									T	T														S	G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	.	.	.	.	.	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R
Query Conservation																																							.	.	.	.	.
Alig confidence																																							.	.	.	.	.																																		.
Template Conservation																																																																													.
Template Sequence		W	L	R	D	H	C	L	Q	T	G	D	A	F	L	I	V	F	S	V	T	D	R	R	S	F	S	K	V	P	E	T	L	L	R	L	R	A	G	R	P	H	H	D	L	P	V	I	L	V	G	N	K	S	D	L	A	R	S	R	E	V	S	L	E	E	G	R	H	L	A	G	T	L	S	C	.	K	H	I	E
Template Known Secondary structure												S								T	T							T												S	T	T	S											T	T		T	T	T			S												T	T		.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	A	A	L	H	H	N	T	R	E	L	F	E	G	A	V	R	Q	I
Template Known Secondary structure			B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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