Job Description P60785 Confidence 99.76% Date Thu Jan 5 12:07:11 GMT 2012 Rank 70 Aligned Residues 162 % Identity 21% Template c3c5hA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the ras homolog domain of human grlf12 (p190rhogap) Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.										.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Query Sequence		N	F	S	I	I	A	H	I	D	H	.	.	.	.	.	.	.	.	.	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	.	.	.	.	.	.	.	.	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G
Query Conservation												.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		N	I	S	V	V	G	L	S	G	T	E	K	E	K	G	Q	C	G	I	G	K	S	C	L	C	N	R	F	V	R	P	S	A	D	E	F	H	L	D	H	T	S	V	L	S	T	S	D	F	G	G	R	V	V	N	N	D	H	F	L	Y	W	G	E	V	S	K	M	H	I	V	E	Q	.	.	.	.	.	.	.
Template Known Secondary structure								S				T	T	T	T	T	T				S												S	T	T	T			S												T	S	T	T	T	T	T		S																.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																																						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.																																																																									.
Template Sequence		.	.	.	T	E	F	I	D	D	Q	T	F	Q	P	H	R	S	T	A	L	Q	P	Y	I	K	R	A	A	A	T	K	L	A	S	A	E	K	L	M	Y	F	C	T	D	Q	L	G	L	E	Q	D	F	E	Q	K	Q	M	P	D	G	K	L	L	V	D	G	F	L	L	G	I	D	V	S	R	.	N	F	D	D
Template Known Secondary structure		.	.	.						T	T	T		S	B	T	T	G	G	G									T		S					T	T		B					G	G	G	T	T		G	G	G	S				B		G	G	G														B		.
Template Predicted Secondary structure		.	.	.																																																																									.
Template SS confidence
					97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.
		112	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		T	L	A	N	C	Y	T	A	M	E	M	.	.	.	.	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																					.	.
Template Conservation																																					.	.
Template Sequence		Q	L	K	F	V	S	N	L	Y	N	Q	L	A	K	T	K	K	P	I	V	V	V	L	T	K	C	D	E	G	V	E	R	Y	I	R	.	.	D	A	H	T	F	A	L	S	K	K	N	L	Q	V	V	E	T	S	A	R	S	N	V	N	V	D	L	A	F	S	T	L	V	Q	L	I
Template Known Secondary structure																T	T										G	G	G	B							.	.								T	S	S	S							B	T	T	T	T	B	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions