Job Description P60785 Confidence 99.61% Date Thu Jan 5 12:07:11 GMT 2012 Rank 96 Aligned Residues 157 % Identity 13% Template c2xtpA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of nucleotide-free human gimap2, amino2 acid residues 1-260 Resolution 1.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.												.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	Q	A	F	E	S	K	L	G	S	Q	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	T	C	S	K	S	Q	G	S	W	G	.	.	.	.	.	N	R	E	I	V	I	I	D	T	P	D	X	F	S	W	K
Template Known Secondary structure									T	T	S											T	S			S				T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.			S									T	.	.	.	.	.	T										G	G	G	G	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.														.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
								81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																											.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																											.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	.	.	.	.	.	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	.	.	.	.	.	.	E	R	V
Query Conservation		.	.	.	.	.	.																																											.	.	.	.	.																			.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																									.																		.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																.
Template Sequence		D	H	C	E	A	L	Y	K	E	V	Q	R	C	Y	L	L	S	A	P	G	P	H	V	L	L	L	V	T	Q	L	.	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	X	G	H	T	I	V	L	F	T	H	K	E	D	L	N	G	G	S	L	X	D	Y	X	H	D	S	D
Template Known Secondary structure																			T	T			S								T	.	T																			G	G	G	G	G	G								G	G	G	G	T	T
Template Predicted Secondary structure																																.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	.	.	.	.	.	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		N	K	A	L	S	K	L	V	A	A	C	G	G	R	I	C	A	F	N	N	R	A	E	G	S	N	Q	D	D	Q	V	K	E	L	X	D	C	I	E	D	L	L	X
Template Known Secondary structure												T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions