Job Description P60785 Confidence 99.62% Date Thu Jan 5 12:07:11 GMT 2012 Rank 93 Aligned Residues 160 % Identity 18% Template c2wkqA_ PDB info PDB header:transferase, cell adhesion Chain: A: PDB Molecule:nph1-1, ras-related c3 botulinum toxin substrate PDBTitle: structure of a photoactivatable rac1 containing the lov22 c450a mutant Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	I	R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H
Query Conservation
Alig confidence																										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		K	E	L	I	K	C	V	V	V	G	D	G	A	V	G	K	T	C	L	L	I	S	Y	T	.	.	T	N	A	F	P	G	E	Y	I	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	D	N	Y	S	A	N	V	M	V	.	.	.	D	G	K	P	V	N	L	G	L	W	D	T	A	G	L
Template Known Secondary structure		T	T									S	T	T	S	S										.	.		S					S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											.	.	.	T	T
Template Predicted Secondary structure																										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.			.	.	570	.	.	.	.	.	.	.	.															.	580	.	.	.	.	.	.	.	.	.				590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.													.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	.	.	.	.	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I	D	L	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	D	P	E	R	V	A	E
Query Conservation																																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	Y	D	R	L	R	P	L	S	Y	P	Q	T	D	V	F	L	I	C	F	S	L	V	S	P	A	S	F	H	H	V	R	A	K	W	Y	P	E	V	R	H	H	C	P	N	T	P	I	I	L	V	G	T	K	L	D	L	R	D	D	K	D	T	I	E	K	L	K	E	K	K	L	T	P	I	T	Y	P	Q
Template Known Secondary structure		G	G	G	T	T	T	G	G	G	G		T	T		S								T	T											T										T	T	S													T											T	T
Template Predicted Secondary structure
Template SS confidence
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	A	M	A	K	E	I	G	A	V	K	Y	L	E	C	S	A	L	T	Q	R	G	L	K	T	V	F	D	E	A	I	R	A	V
Template Known Secondary structure									T	T		S							T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions