Job Description P60785 Confidence 99.56% Date Thu Jan 5 12:07:11 GMT 2012 Rank 100 Aligned Residues 152 % Identity 18% Template c2wjjB_ PDB info PDB header:metal transport Chain: B: PDB Molecule:ferrous iron transport protein b homolog; PDBTitle: structure and function of the feob g-domain from2 methanococcus jannaschii Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.												.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Sequence		E	I	A	L	I	G	N	P	N	V	G	K	S	T	I	F	N	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	E	N	V	Y	I	G	N	W	P	G	V	T	V	E	K	K	E	G	E	F	E	Y	N	.	.	.	.	.	G	E	K	F	K	V	V	D	L	P	G	V	Y	S	L	T
Template Known Secondary structure								S	T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S								T	T	S												T	.	.	.	.	.	T												S		S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
					81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D
Query Conservation		.	.	.
Alig confidence		.	.	.																											.	.																																.	.
Template Conservation																															.	.																																.	.
Template Sequence		A	N	S	I	D	E	I	I	A	R	D	Y	I	I	N	E	K	P	D	L	V	V	N	I	V	D	A	T	A	.	.	L	E	R	N	L	Y	L	T	L	Q	L	X	E	X	G	A	N	L	L	L	A	L	N	K	X	D	L	A	K	S	L	.	.	G	I	E	I	D	V	D	K	L	E	K	I	L	G	V	K
Template Known Secondary structure		S	S	S																S								G	G	G	.	.														T	T																T	.	.	T												S		S
Template Predicted Secondary structure																															.	.																																.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	P	L	S	A	A	K	K	X	G	I	E	E	L	K	K	A	I	S	I	A	V	K
Template Known Secondary structure							T	T	T	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions