Job Description P60785 Confidence 97.85% Date Thu Jan 5 12:07:11 GMT 2012 Rank 307 Aligned Residues 156 % Identity 12% Template c2qy9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	.	.	.	.	.	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		F	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	.	.	.	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A
Template Known Secondary structure										T	T	S										.	.	.						T	T	T										T	T															T	T							S	T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
					69	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	E	T	Y	Q	L	N	F	I	D	T	P	G	.	.	.	.	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	.	.	.	.	.	.	.	.	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I
Query Conservation		.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence		.	.	.													.	.	.	.																	.	.	.	.	.	.	.	.										.	.
Template Conservation																																																						.	.
Template Sequence		A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	.	.	T	G	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	G	I	T	L	T	K	L
Template Known Secondary structure					T	T		S										G	G	G																T	T	T		T	T			S								G	G	.	.	G	T														S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.			.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V
Query Conservation
Alig confidence				.															.	.	.	.									.	.
Template Conservation				.															.	.	.	.									.	.
Template Sequence		D	G	.	T	A	K	G	G	V	I	F	S	V	A	D	Q	F	.	.	.	.	G	I	P	I	R	Y	I	G	.	.	V	G	E	R	I	E	D	L
Template Known Secondary structure		T	T	.		T	T	T	T										.	.	.	.									.	.		S	S	S	G	G	G
Template Predicted Secondary structure				.															.	.	.	.									.	.
Template SS confidence
		449	450		.	.	.	.	.	.	.	.	.	460	.	.	.	.					.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions