Job Description P60785 Confidence 99.87% Date Thu Jan 5 12:07:11 GMT 2012 Rank 49 Aligned Residues 148 % Identity 18% Template c2qthA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of a gtp-binding protein from the2 hyperthermophilic archaeon sulfolobus solfataricus in3 complex with gdp Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		N	I	R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	.
Query Conservation																																																																																	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.													.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		I	I	P	S	I	G	I	V	G	Y	T	N	S	G	K	T	S	L	F	N	S	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	S	P	K	R	Y	A	I	P	I	N	.	.	.	.	.	N	R	K	I	M	L	V	D	T	V	G	F	I
Template Known Secondary structure											B	T	T	S	S										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S								T	.	.	.	.	.	T											B
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																											.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.
									82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.
Predicted Secondary structure		.	.	.	.	.	.	.																																.	.	.	.	.	.																																	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																.	.	.	.	.	.																																	.	.	.
Query Sequence		.	.	.	.	.	.	.	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	.	.	.	.	.	.	L	A	N	C	Y	T	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	.	.	.	E
Query Conservation		.	.	.	.	.	.	.																																.	.	.	.	.	.																																	.	.	.
Alig confidence		.	.	.	.	.	.	.																																.	.	.	.	.	.																																	.	.	.
Template Conservation
Template Sequence		R	G	I	P	P	Q	I	V	D	A	F	F	V	T	L	S	E	A	K	Y	S	D	A	L	I	L	V	I	D	S	T	F	S	E	N	L	L	I	E	T	L	Q	S	S	F	E	I	L	R	E	I	G	V	S	G	K	P	I	L	V	T	L	N	K	I	D	K	I	N	G	D	L	Y	K	K	L	D	L	V	E
Template Known Secondary structure		S	S			G	G	G										G	G	G	G	S	S								T	T	S																				T			S										G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	S	K	E	L	Y	S	P	I	F	D	V	I	P	I	S	A	L	K	R	T	N	L	E	L	L	R	D	K	I	Y	Q	L	A	T
Template Known Secondary structure									S									B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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