Job Description P60785 Confidence 97.13% Date Thu Jan 5 12:07:11 GMT 2012 Rank 329 Aligned Residues 157 % Identity 13% Template c2ph1A_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:nucleotide-binding protein; PDBTitle: crystal structure of nucleotide-binding protein af2382 from2 archaeoglobus fulgidus, northeast structural genomics target gr165 Resolution 2.70 Å

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		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure								.																																				.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																																				.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	F	S	I	I	.	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	.	.	.	.	.	.	.	.	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	.	.	.	.	.	.	.	.	.	.
Query Conservation								.																																				.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence								.															.	.	.																			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.
Template Sequence		S	R	I	A	V	X	S	G	K	G	G	V	G	K	S	T	V	T	A	L	L	.	.	.	A	V	H	Y	A	R	Q	G	K	K	V	G	I	L	D	A	D	F	L	G	P	S	I	P	I	L	F	G	L	R	N	A	R	I	A	V	S	A	E	G	L	E	P	V	L	T	Q	K	Y	G	I	K	V	X	S	X
Template Known Secondary structure									S	S	S		T	T									.	.	.							T	T										S	S								T	T			S							T	T								T	T	T							G
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
																														66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	L	L	P	K	E	N	T	P	V	I	W	R	G	P	L	I	A	G	X	I	R	E	F	L	G	R	V	A	W	G	E	L	D	H	L	L	I	D	L	P	P	G	T	G	D	A	P	L	T	V	X	Q	D	A	K	P	T	G	V	V	V	V	S	T	P	Q	E	L	T	A	V	I	V	E	K	A	I	N
Template Known Secondary structure		G	G	G	S	T	T		S	S						S													S	B				S		S								S	S	S	S	S												S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		T	A	M	E	M	D	L	E	V	V	P	V	L	.	.	.	.	.	.	.	.	.	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C	S	A	K
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	A	E	E	T	N	T	S	V	L	G	L	V	E	N	X	S	Y	F	V	C	P	N	C	G	H	K	S	Y	I	F	G	E	G	K	G	E	S	L	A	K	K	Y	N	I	G	F	F	T	S	I	P	I	E	E	E
Template Known Secondary structure					T	T	T									T	T						T	T	T						T	T												T	T		S							B
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions