Job Description P60785 Confidence 98.49% Date Thu Jan 5 12:07:11 GMT 2012 Rank 287 Aligned Residues 136 % Identity 18% Template c2j1lA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rho-related gtp-binding protein rhod; PDBTitle: crystal structure of human rho-related gtp-binding protein2 rhod Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	N	I	R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G
Query Conservation
Alig confidence							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		V	R	S	V	K	.	V	V	L	V	G	D	G	G	C	G	K	T	S	L	L	M	V	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	P	T	V	F	E	R	Y	M	V	N	L	Q	V	K	G	K	P	V	H	L	H	I	W	D	.	.	.	.	.
Template Known Secondary structure							.							T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T										.	.	.	.	.
Template Predicted Secondary structure							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		15	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.															.	.	.	.	140	.	.
Predicted Secondary structure																																								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	.	.	.	.	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	D	P	E	R
Query Conservation																																								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	T	D	A	S	V	L	L	L	C	F	D	V	T	S	P	N	S	F	D	N	I	F	N	R	W	Y	P	E	V	N	H	F	C	K	K	V	P	I	I	V	V	G	C	K	T	D	L	R	K	D	K	S	L	V	N	K	L	R	R	N	G	L	E	P	V	T	Y	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												T	T											T										S	S										G	G	G	G	S											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		R	G	Q	E	M	A	R	S	V	.	.	G	A	V	A	Y	L	E	C	S	A	R	L	H	D	N	V	H	A	V	F	Q	E	A	A	E	V	A
Template Known Secondary structure										T	.	.	T		S						B	T	T	T	T	B	S
Template Predicted Secondary structure											.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions