Job Description P60785 Confidence 98.98% Date Thu Jan 5 12:07:11 GMT 2012 Rank 250 Aligned Residues 163 % Identity 18% Template c2j0vD_ PDB info PDB header:nucleotide-binding protein Chain: D: PDB Molecule:rac-like gtp-binding protein arac7; PDBTitle: the crystal structure of arabidopsis thaliana rac7-rop9:2 the first ras superfamily gtpase from the plant kingdom Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	N	I	R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G
Query Conservation
Alig confidence																											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	K	F	I	K	C	V	T	V	G	D	G	A	V	G	K	T	C	M	L	I	C	Y	T	.	.	S	N	K	F	P	T	D	Y	I	P	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	N	F	S	A	N	V	A	V	D	G	Q	I	V	N	L	G	L	W	D	T	A	G
Template Known Secondary structure													S	T	T	S	S										.	.		S				S	S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S
Template Predicted Secondary structure																											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.																		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	.	C	Y	T	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I	D	L	.	.	.	.	.	.	.	.	.	.	P	A	A	D	P	E	R	V	A	E	E	I	E	D
Query Conservation																																					.																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	D	Y	R	P	L	S	Y	R	G	A	D	I	F	V	L	A	F	S	L	I	S	K	A	S	Y	E	N	V	L	K	K	W	M	P	E	L	R	R	F	A	P	N	V	P	I	V	L	V	G	T	K	L	D	L	R	D	D	K	G	Y	L	A	D	H	T	N	V	I	T	S	T	Q	G	E	E	L	R	K
Template Known Secondary structure								G	G	G	T	T		S								T	T											T										T	T														T									S	S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P	P	P	E
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		Q	I	G	.	.	A	A	A	Y	I	E	C	S	S	K	T	Q	Q	N	V	K	A	V	F	D	T	A	I	K	V	V	L	Q	P	P
Template Known Secondary structure				T	.	.		S							T	T	T		T	T														S
Template Predicted Secondary structure					.	.
Template SS confidence
		147	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions