Job Description P60785 Confidence 99.36% Date Thu Jan 5 12:07:11 GMT 2012 Rank 140 Aligned Residues 157 % Identity 20% Template c2fg5A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ras-related protein rab-31; PDBTitle: crystal structure of human rab31 in complex with a gtp2 analogue Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	C	L	L	G	D	T	G	V	G	K	S	S	I	V	C	R	F	V	Q	D	H	F	D	H	N	I	S	P	T	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	F	M	T	K	T	V	P	C	G	N	E	L	H	K	F	L	I	W	D	T	A	G	Q	E	R	F	H
Template Known Secondary structure									T	T	S	S															T	T					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S	S												S	G	G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	.	.	.	.	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C
Query Conservation																																									.	.	.	.
Alig confidence																																									.	.	.	.																																.
Template Conservation																																																																												.
Template Sequence		S	L	A	P	M	Y	Y	R	G	S	A	A	A	V	I	V	Y	D	I	T	K	Q	D	S	F	Y	T	L	K	K	W	V	K	E	L	K	E	H	G	P	E	N	I	V	M	A	I	A	G	N	K	C	D	L	S	D	I	R	E	V	P	L	K	D	A	K	E	Y	A	E	S	I	G	A	.	I	V	V	E	T
Template Known Secondary structure		G	G	T					T	T		S								T	T		T																	S		T	T										G	G	G	G	G	G			S											T	T	T		.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	K	N	A	I	N	I	E	E	L	F	Q	G	I	S	R	Q	I	P
Template Known Secondary structure		B	T	T	T	T	B	S											T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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