Job Description P60785 Confidence 98.95% Date Thu Jan 5 12:07:11 GMT 2012 Rank 254 Aligned Residues 153 % Identity 21% Template c2f9lA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rab11b, member ras oncogene family; PDBTitle: 3d structure of inactive human rab11b gtpase Resolution 1.55 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	V	L	I	G	D	S	G	V	G	K	S	N	L	L	S	R	F	T	R	N	E	F	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	I	G	V	E	F	A	T	R	S	I	Q	V	D	G	K	T	I	K	A	Q	I	W	D	T	A	G	Q	E	R	Y	R
Template Known Secondary structure							S	S	T	T	S	S											S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S											T	T											S	S	G	G	G	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	.	.	.	.	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.																					.
Template Conservation																																																															.
Template Sequence		R	I	T	S	A	Y	Y	R	G	A	V	G	A	L	L	V	Y	D	I	A	K	H	L	T	Y	E	N	V	E	R	W	L	K	E	L	R	D	H	A	D	S	N	I	V	I	M	L	V	G	N	K	S	D	L	R	H	L	R	A	V	P	.	T	D	E	A	R	A	F	A	E	K	N	N	L	S	F	I	E	T
Template Known Secondary structure									T	T		S								T	T							T												S		T	T										T	T		G	G	G			S		.											T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	L	D	S	T	N	V	E	E	A	F	K	N	I	L	T	E	I
Template Known Secondary structure			T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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