Job Description P60785 Confidence 99.09% Date Thu Jan 5 12:07:11 GMT 2012 Rank 230 Aligned Residues 159 % Identity 19% Template c2f7sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ras-related protein rab-27b; PDBTitle: the crystal structure of human rab27b bound to gdp Resolution 2.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	L	A	L	G	D	S	G	V	G	K	T	T	F	L	Y	R	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	K	F	N	P	K	F	I	T	T	V	G	I	D	F	R	E	K	R	V	V	Y	N	A	G	K	A	F	K	V	H	L	Q	L	W	D	T	A	G	Q	E	R	F	R
Template Known Secondary structure							S		T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																																						S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	.	.	.	.	.	M	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R
Query Conservation																																						.	.	.	.	.
Alig confidence																																						.	.	.	.	.																						.
Template Conservation																																																																.
Template Sequence		S	L	T	T	A	F	F	R	D	A	M	G	F	L	L	M	F	D	L	T	S	Q	Q	S	F	L	N	V	R	N	W	M	S	Q	L	Q	A	N	A	Y	C	E	N	P	D	I	V	L	I	G	N	K	A	D	L	P	D	Q	R	E	V	N	.	E	R	Q	A	R	E	L	A	D	K	Y	G	I	P	Y	F	E
Template Known Secondary structure									T	T										T	T														T						T	T	T											T	T		G	G	G			S		.											T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	A	A	T	G	Q	N	V	E	K	A	V	E	T	L	L	D	L	I
Template Known Secondary structure			B	T	T	T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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