Job Description P60785 Confidence 97.69% Date Thu Jan 5 12:07:11 GMT 2012 Rank 313 Aligned Residues 125 % Identity 18% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	.	.	.	.	.	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.															.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	I	A	K	L	G	R	Y	Y	.	.	.	Q	N	L	G	K	K	V	M	F	C	A	G	D	T	F	R	A	A	G	G	T	Q	L	S	E	W	G	K	R	L	S	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	Q	A
Template Known Secondary structure		S							S	T	T	S	S													.	.	.		T	T	T											S	S	T	T													T								T	T	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
			67	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.															.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence		.															.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		.	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	.	.	.	.	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	.	.	.	.	.	.	.	.	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I
Query Conservation		.															.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence		.															.	.	.	.															.	.	.	.	.	.	.	.															.																			.
Template Conservation																																																									.																			.
Template Sequence		M	K	A	R	G	Y	D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I	A	K	A	D	P	E	E	P	K	E	V	W	L	V	L	D	A	V	T	G	Q	.	N	G	L	E	Q	A	K	K	F	H	E	A	V	G	L	T	G	V	.	I	V	T	K	L
Template Known Secondary structure					T	T		S											T	T																				T	T											T	T			T	.																S			.					T
Template Predicted Secondary structure																																																									.																			.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.
		134
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		258

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions