Job Description P60785 Confidence 99.80% Date Thu Jan 5 12:07:11 GMT 2012 Rank 61 Aligned Residues 160 % Identity 21% Template c1udxA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:the gtp-binding protein obg; PDBTitle: crystal structure of the conserved protein tt1381 from thermus2 thermophilus hb8 Resolution 2.07 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	N	I	R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		L	M	L	I	A	D	V	G	L	V	G	Y	P	N	A	G	K	S	S	L	L	A	A	M	T	R	A	H	P	K	I	A	P	Y	P	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	S	P	N	L	G	V	V	E	V	S	.	.	.	.	E	E	E	R	F	T	L	A	D	I	P	G
Template Known Secondary structure					S		S							G	G	G											S	S								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										S	.	.	.	.	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.
		81								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																																											.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.																																											.	.	.	.	.
Query Sequence		H	.	.	.	.	.	.	.	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	.	.	.	.	.	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E
Query Conservation			.	.	.	.	.	.	.																																											.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																																											.	.	.	.	.															.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		I	I	E	G	A	S	E	G	K	G	L	G	L	E	F	L	R	H	I	A	R	T	R	V	L	L	Y	V	L	D	A	A	D	E	P	L	K	T	L	E	T	L	R	K	E	V	G	A	Y	D	P	A	L	L	R	R	P	S	L	V	A	L	N	K	V	D	L	L	E	.	.	.	E	E	A	V	K	A	L	A
Template Known Secondary structure						G	G	G	S			S									T	S	S	S								T	T	S																							S										T	T	S		.	.	.
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	L	A	R	E	G	L	A	V	L	P	V	S	A	L	T	G	A	G	L	P	A	L	K	E	A	L	H	A	L	V	R	S
Template Known Secondary structure						T	T	T	S							T	T	T		T	T														T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions