Job Description P60785 Confidence 100.00% Date Thu Jan 5 12:07:11 GMT 2012 Rank 20 Aligned Residues 267 % Identity 25% Template c1skqB_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 1-alpha; PDBTitle: the crystal structure of sulfolobus solfataricus elongation2 factor 1-alpha in complex with magnesium and gdp Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	.	.	.	.	.	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.																													.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		N	L	I	V	I	G	H	V	D	H	G	K	S	T	L	V	G	R	L	L	M	D	R	G	F	I	D	E	K	T	V	K	E	A	E	E	A	A	K	K	L	G	K	E	S	E	K	F	A	F	L	L	D	R	L	K	E	E	M	R	F	E	T	K	.	.	.	.	.	K	Y	F	F	T	I	I	D	A	P	G
Template Known Secondary structure								S	T	T	S	S													B				S	S												T	T		T	T												T							S	.	.	.	.	.	S									T	T
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.																		.																.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.																		.																.	.	.	.	.
Query Sequence		H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	.	.	.	.	.	.	.	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	.	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	.	.	.	.	.	P	E	R	V	A	E	E	I
Query Conservation																													.	.	.	.	.	.	.																		.																.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.																		.																.	.	.	.	.
Template Conservation
Template Sequence		H	R	D	F	V	K	N	M	I	T	G	A	S	Q	A	D	A	A	I	L	V	V	S	A	K	K	G	E	Y	E	A	G	M	S	V	E	G	Q	T	R	E	H	I	I	L	A	K	T	M	G	L	D	Q	L	I	V	A	V	N	K	M	D	L	T	E	P	P	Y	D	E	K	R	Y	K	E	I	V	D	Q	V
Template Known Secondary structure		S	T	T								S	S	S			S									S	T	T						S	S	S	S													T	T											G	G	G	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		148	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.												.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	I	V	.	.	.	.	.	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	.	.	.	.	.	.	.	.	.	.	.	V	L	E	R	L	V	R	D	I	P	P	P	E	G	D	P	E	G	P	L	Q	A	L	I	I	D	S	W	F	D	N	Y	L	G	V	V	S	L	I	R
Query Conservation						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	F	M	R	S	Y	G	F	N	T	N	K	V	R	F	V	P	V	V	A	P	S	G	D	N	I	T	H	K	S	E	N	M	K	W	Y	N	G	P	T	L	E	E	Y	L	D	Q	L	E	L	P	P	K	P	V	D	K	P	L	R	I	P	I	Q	D	V	Y	S	I	S	G	V	G	T	V	P	V	G	R
Template Known Secondary structure								T	T				T	T							B	T	T	T	T	B	T	T	T	B			S	T	T	T	T			S									T							G	G	G	S			B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	N	G	T	L	R	K	G	D	K	V	K	V	M	S	T	G	Q	T	Y	N	A	D	R	L	G	I	F	T	P	K	Q	V	D	R	T	E	L	K	C	G	E	V	G	W	L	V	C	A	I	K	D	I	H	G	A	P	V	G	D	T	L	T	L	A	R	N	P
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		V	E	S	G	V	L	K	V	G	D	K	I	V	F	M	P	A	G	K	V	G	E	V	R	S	I	E	T	.	.	.	H	H	T	K	M	D	K	A	E	P	G	D	N	I	G	F	N	V	R	G	V	E	K	K	D	I	K	R	G	D	V	V	G	H	P	N	N	P
Template Known Secondary structure				B	S				T	T							T	T	T											.	.	.	S	S				S				T	T									S			G	G	G			T	T					B	T	T	B
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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