Job Description P60785 Confidence 100.00% Date Thu Jan 5 12:07:11 GMT 2012 Rank 31 Aligned Residues 265 % Identity 18% Template c1s0uA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	.	.	.	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V
Query Conservation																									.	.	.
Alig confidence																									.	.	.																																					.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		N	I	G	M	V	G	H	V	D	H	G	K	T	S	L	T	K	A	L	T	G	V	W	T	D	R	G	I	S	I	R	L	G	Y	A	D	C	E	I	R	K	C	P	Q	C	G	T	Y	T	T	K	P	R	C	P	N	C	L	A	E	T	E	.	.	.	.	F	L	R	R	V	S	F	V	D	S	P	G	H	E
Template Known Secondary structure							S		T	T	S	S										S																						T	T	T					S	S	S	B		T	T	S			B			.	.	.	.											S	S
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																	.															.
Query SS confidence																												.																	.															.
Query Sequence		D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	.	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	.	E	V	V	P	V	L	N	K	I	D	L	P	A	A	.	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V
Query Conservation																												.																	.															.
Alig confidence																												.																	.															.																					.
Template Conservation																																																																																	.
Template Sequence		T	L	M	A	T	M	L	S	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	Q	P	Q	T	K	E	H	L	M	A	L	E	I	L	G	I	D	K	I	I	I	V	Q	N	K	I	D	L	V	D	E	K	Q	A	E	E	N	Y	E	Q	I	K	E	F	V	K	G	T	I	A	E	N	.
Template Known Secondary structure									T	T		S			S								T	T	S		S	S														T	T											T	T	S	S		T	T	T	T	T	T										T	T	S	T	T	T	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																										.	.	.	.	.	.	.	.																																.
Query SS confidence																																										.	.	.	.	.	.	.	.																																.
Query Sequence		R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P	P	P	E	G	D	P	E	G	P	L	Q	A	L	I	I	D	S	W	.	.	.	.	.	.	.	.	F	D	N	Y	L	G	V	V	S	L	I	R	I	K	N	G	T	L	R	K	G	D	K	V	K	V	M	S	T	G	Q	.
Query Conservation																																										.	.	.	.	.	.	.	.																																.
Alig confidence		.	.																																							.	.	.	.	.	.	.	.																																.
Template Conservation		.	.
Template Sequence		.	.	A	P	I	I	P	I	N	I	D	V	L	L	K	A	I	Q	D	F	I	P	T	P	K	R	D	P	D	A	T	P	R	M	Y	V	A	R	S	F	D	I	N	K	P	G	T	E	I	K	D	L	K	G	G	V	L	G	G	A	I	I	Q	G	V	F	K	V	G	D	E	I	E	I	R	P	G	I	K	V
Template Known Secondary structure		.	.																			S							T	T	S															S	S			G	G	G													S				T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
													231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	T	Y	N	A	D	R	L	G	I	F	T	P	K	Q	V	D	R	T	E	L	K	C	G	E	V	G	W	L	V	C	A	.	.	.	I	K	D	I	H	G	A	P	V	G	D	T	L	T	L	A	R	N	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.										.	.	.																				.	.	.
Template Conservation																						.	.	.
Template Sequence		T	E	G	N	K	T	F	W	K	P	L	T	T	K	I	V	S	L	A	A	.	.	.	G	N	T	I	L	R	K	A	H	P	G	G	L	I	G	V	G	T	T	L	D	P	Y	L	T	K	S	D	A	L	T	G	S	V	V	G	L	P	G	T	L
Template Known Secondary structure				T	T																	.	.	.	T	T				S				S	S	S							S	S		G	G	G	T	G	G	G	T	T	T	T					S	T	T		S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions