Job Description P60785 Confidence 99.93% Date Thu Jan 5 12:07:11 GMT 2012 Rank 39 Aligned Residues 152 % Identity 22% Template c1mkyA_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:probable gtp-binding protein enga; PDBTitle: structural analysis of the domain interactions in der, a2 switch protein containing two gtpase domains Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	I	R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	A	I	K	V	A	I	V	G	R	P	N	V	G	K	S	T	L	F	N	A	I	L	N	K	E	R	A	L	V	S	P	I	P	V	D	D	E	V	F	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	K	Y	V	F	V	D	T	A	G	L
Template Known Secondary structure			S									S	T	T	S	S										T	S	T	T															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						S	S		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																										.	.	.	.	.	.	.	.	.	230	.	.
		82	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure					.																																																									.	.	.																	.
Query SS confidence					.																																																									.	.	.																	.
Query Sequence		V	D	F	.	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	.	.	.	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	.
Query Conservation					.																																																									.	.	.																	.
Alig confidence					.																																																									.	.	.																	.
Template Conservation
Template Sequence		E	K	Y	S	N	Y	R	V	V	D	S	I	E	K	A	D	V	V	V	I	V	L	D	A	T	Q	G	I	T	R	Q	D	Q	R	X	A	G	L	X	E	R	R	G	R	A	S	V	V	V	F	N	K	W	D	L	V	V	H	R	E	K	R	Y	D	E	F	T	K	L	F	R	E	K	L	Y	F	I	D	Y	S
Template Known Secondary structure				S													S								T	T	T																T	T										G	G	G	S	T	T	G	G	G														G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	I	F	T	S	A	D	K	G	W	N	I	D	R	X	I	D	A	X	N	L
Template Known Secondary structure							B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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