Job Description P60785 Confidence 98.04% Date Thu Jan 5 12:07:11 GMT 2012 Rank 300 Aligned Residues 133 % Identity 16% Template c1cipA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (guanine nucleotide-binding protein PDBTitle: gi-alpha-1 subunit of guanine nucleotide-binding protein2 complexed with a gtp analogue Resolution 1.50 Å

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		42	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	M	D	L	E	R	E	.	.	.	.	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		N	Y	I	P	T	Q	Q	D	V	L	R	T	R	V	K	T	T	G	I	V	E	T	H	F	T	F	K	.	.	.	.	.	D	L	H	F	K	M	F	D	V	G	G	Q	R	S	E	R	K	K	W	I	H	C	F	E	G	V	T	A	I	I	F	C	V	A	L	S	D	Y	D	L	V	L	A	E	D	E	E	M
Template Known Secondary structure		T										T							S									T	.	.	.	.	.	T											S	G	G	G	G	G	G	G	G	G	G		T	T		S								G	G	G	G	G				T	T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.																				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.	.	.	.
Predicted Secondary structure																			.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	.	.	.	.	L	E	V	V	P	V	L	N	K	I	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	.	.	.	.	.	.	.	I	D	A	T
Query Conservation																			.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence																			.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.															.	.	.	.	.	.	.
Template Conservation																																																								.
Template Sequence		N	R	M	H	E	S	M	K	L	F	D	S	I	C	N	N	K	W	F	T	D	T	S	I	I	L	F	L	N	K	K	D	L	F	E	E	K	I	K	K	S	P	L	T	I	C	Y	P	E	Y	A	G	S	N	.	T	Y	E	E	A	A	A	Y	I	Q	C	Q	F	E	D	L	N	K	R	K	D	T	K	E	I
Template Known Secondary structure																T		G	G	G	T	T	S																	T	T	S		G	G	G	T		T	T			S		S	.															T	T		S		T	T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	H	F	T	C	A	T	D	T	K	N	V	Q	F	V	F	D	A	V	T	D	V	I
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions