Job Description P0CF87 Confidence 25.55% Date Thu Jan 5 11:31:44 GMT 2012 Rank 233 Aligned Residues 53 % Identity 11% Template c1yj7A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:escj; PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		M	S	N	I	T	I	Y	H	N	P	A	C	G	T	S	R	N	T	L	E	M	L	H	N	N	G	N	E	P	T	I	I	N	.	.	.	.	.	.	.	Y	L	D	M	P	P	T	R	D	E	L	I	K	L	I	S	D	I	F	S	D	K
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence					.																														.	.	.	.	.	.	.																			.
Template Conservation					.																																																							.
Template Sequence		M	K	E	.	Q	L	Y	T	G	L	T	E	K	E	A	N	Q	M	Q	A	L	L	L	S	N	D	V	N	V	S	K	E	M	D	K	S	G	N	M	T	L	S	V	A	A	A	D	F	V	R	A	I	T	I	L	N	N	N	.	G	F	P
Template Known Secondary structure					.																					T	T									T	T	S								G	G	G											T	.	T		S
Template Predicted Secondary structure					.																																																							.
Template SS confidence
		20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions