Job Description P0ABP3 Confidence 0.74% Date Thu Jan 5 11:15:59 GMT 2012 Rank 65 Aligned Residues 100 % Identity 8% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	I	L	T	M	L	A	A	V	T	T	G	S	G	N	A	P	F	Y	A	F	V	E	M	I	P	K	L	A	H	S	S	G	I	N	P	A	Y	L	T	I	P	M	L	Q	A	S	N	L	G	R	T	L	S	P	V	S	G	V	V	V	A	V	A	G	M	A	K	I	S	P	F	E	V	V	K	R	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S
Template Known Secondary structure																																	T	S			S							G	G	G	T																	T	T	T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	V	L	V	G	L	V	I	V	I	V	A	T	E	L	M	V	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A
Template Known Secondary structure															T	T	T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions