Job Description P0ABP3 Confidence 0.81% Date Thu Jan 5 11:15:59 GMT 2012 Rank 51 Aligned Residues 113 % Identity 9% Template c2oarA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl) Resolution 3.50 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	P	Y	L	L	M	I	A	A	Y	F	V	A	C	L	M	S	L	A	V	S	S	A	T	G	L	G	V	L	L	M	A	T	L	F	P	V	M	V	N	V	G	I	S	R	G	A	A	A	A	I	C	A	S	P	A	A	I	I	L	A	P	T	S	G	D	V	V	L	A	A	Q	A	S	E	M	S	L	I
Query Conservation
Alig confidence																									.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	N	I	V	D	L	A	V	A	V	V	I	G	T	A	F	T	A	L	V	T	K	.	.	.	.	.	.	F	T	D	S	I	I	T	P	L	I	N	R	I	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Q	S	D	V	G	I	L	R	I	G	I	G	G	G	Q	T	I	D	L	N
Template Known Secondary structure		S																							.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T			S
Template Predicted Secondary structure																									.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		D	F	A	F	K	T	T	L	P	I	S	I	A	A	I	I	.	G	M	A	I	A	H	F	F	W	Q	R	Y	L	D	K	K	E	H	I	S	H	E	M	L	D	V	S	E	I	T	T	T	A	P	A	F	Y
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		V	L	L	S	A	A	I	N	F	F	L	I	A	F	A	V	Y	F	L	V	V	L	P	Y	N	T	L	R	K	K	G	E	V	E	Q	P	G	D	T	Q	V	V	L	L	T	E	I	R	D	L	L	A	Q	T
Template Known Secondary structure																					T										T	T																							T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions