Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABP3
Confidence1.14%DateThu Jan 5 11:15:59 GMT 2012
Rank31Aligned Residues45
% Identity9%Templatec2ewtA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of the dna-binding domain of bldd
Resolution1.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   380....... ..390.........400.........410.........420.........430
Predicted Secondary structure 

..











Query SS confidence 







. .










































Query Sequence  PKLAHSSG. . INPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVK
Query Conservation   

    
..
 
             
    
            

     

Alig confidence 







..










......

























Template Conservation    

   
  

   

  
 ......
   

   
  

  
 
    


Template Sequence  HGVEEKSQGRWKAVVVGSYER. . . . . . GDRAVTVQRLAELADFYGVPVQELLP
Template Known Secondary structure  TTTSS
......T
S


TS
GGGG

Template Predicted Secondary structure 




......







Template SS confidence 




















































   25....30.........40..... ....50.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions