Job Description P0ACB7 Confidence 36.31% Date Thu Jan 5 11:17:50 GMT 2012 Rank 139 Aligned Residues 97 % Identity 12% Template c3spaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase, mitochondrial; PDBTitle: crystal structure of human mitochondrial rna polymerase Resolution 2.50 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.																																	.	.
Query SS confidence																																				.	.	.	.																																	.	.
Query Sequence		Q	Y	D	D	R	L	L	L	P	I	P	R	L	K	T	N	N	P	E	Q	L	E	K	V	L	R	Q	Q	I	K	N	V	G	D	.	.	.	.	R	P	L	L	W	S	T	L	G	Q	S	L	M	K	H	G	E	W	Q	E	A	S	L	A	F	R	A	A	L	K	Q	R	.	.	P	D	A	Y	D	Y	A	W
Query Conservation																																				.	.	.	.																																	.	.
Alig confidence																																				.	.	.	.																																	.	.
Template Conservation
Template Sequence		Q	Q	Q	R	L	L	A	F	F	K	C	C	L	L	T	D	Q	L	P	L	A	H	H	L	L	V	V	H	H	G	Q	R	Q	K	R	K	L	L	T	L	D	M	Y	N	A	V	M	L	G	W	A	R	Q	G	A	F	K	E	L	V	Y	V	L	F	M	V	K	D	A	G	L	T	P	D	L	L	S	Y	A	A
Template Known Secondary structure																	T															S					T	T																	T															T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	A	D	A	L	D	R	L	H	K	P	E	E	A	A	A	.	M	R	R	D	G	L	M
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		A	L	Q	C	M	G	R	Q	D	Q	D	A	G	T	I	E	R	C	L	E	Q	M	S	Q
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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