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Job DescriptionP0ACB7
Confidence99.60%DateThu Jan 5 11:17:50 GMT 2012
Rank44Aligned Residues263
% Identity9%Templatec3nf1A_
PDB info PDB header:motor protein, transport proteinChain: A: PDB Molecule:kinesin light chain 1; PDBTitle: crystal structure of the tpr domain of kinesin light chain 1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130.........140.........150 .........160.........170........
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Query Sequence  LMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGN. . . . . . . DTIPVEITRVRLQLARNENHAARHGVDK
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Template Sequence  YFQGGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLND
Template Known Secondary structure  S
SSS
TTS
TT

SSSTT
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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  LLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRK
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Template Sequence  ALAIREKTLGK. . . . . . . . . . DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ
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T..........T
TTT

TT
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   281........290. ........300.........310.........320.........330.........340.........350
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  TRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTLGQSL
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Template Sequence  NQGKYEEVE. . . . . . . . . . . . YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGK
Template Known Secondary structure  TTT
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TT
T


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   351........ 360.........370.........380.........390.........400.........410........
 
   339340.........350......... 360.........370.........380.........390
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Query Sequence  MKHGEWQEASLAFRAALKQRP. DAYDYAWLADALDRLHKPEEAAAMRRDGLML
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Template Sequence  PIWMHAEEREECTSFGEYGSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRS
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   425....430.........440.........450.........460.........470.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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