Job Description P0ACB7 Confidence 97.31% Date Thu Jan 5 11:17:50 GMT 2012 Rank 109 Aligned Residues 259 % Identity 13% Template c3lvhA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:clathrin heavy chain 1; PDBTitle: crystal structure of a clathrin heavy chain and clathrin light chain2 complex Resolution 9.00 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	K	L	A	E	G	D	Y	Q	Q	V	E	K	L	M	A	K	N	A	D	H	A	E	Q	P	V	V	N	Y	L	L	A	A	E	A	A	Q	Q	R	G	D	E	A	R	A	N	Q	H	L	E	R	A	A	E	L	A	G	N	D	T	I	P	V	E	I	T	R	V	R	L	Q	L	A	R	N	E	N	H
Query Conservation
Alig confidence																						.	.	.	.	.																																											.	.
Template Conservation																						.	.	.	.	.																																											.	.
Template Sequence		A	K	A	Q	L	Q	K	G	M	V	K	E	A	I	D	S	Y	I	K	A	.	.	.	.	.	D	D	P	S	S	Y	M	E	V	V	Q	A	A	N	T	S	G	N	W	E	E	L	V	K	Y	L	Q	M	A	R	K	K	A	R	E	S	Y	V	E	T	E	L	.	.	I	F	A	L	A	K	T	N	R	L	A
Template Known Secondary structure					T	T	T	S	S	S		T	T	T	T	T	S	S	S		S	.	.	.	.	.	S					S							T	T	T	S				T	T															T	T	T	T				.	.						T	T			S	S
Template Predicted Secondary structure																						.	.	.	.	.																																											.	.
Template SS confidence
		1112	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.						.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.			.	.	.	.	.	.	1180	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	H	G	V	D	K	L	L	E	V	T	P	R	H	P	E	V	L	R	L	A	E	Q	A	Y	I	R	T	G	A	W	S	S	L	L	D	I	I	P	S	M	A	K	A	H	V	G	D	E	E	H	R	A	M	L	E	Q	Q	A	W	I	G	L	M	D	Q	A	R	A	D	N	G	S	E	G	L	R	N
Query Conservation
Alig confidence																		.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	E	E	F	I	N	G	P	N	N	A	H	I	Q	Q	.	.	.	.	.	.	V	G	D	R	C	Y	D	E	K	M	Y	D	A	A	K	L	L	Y	N	N	V	S	N	F	G	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	T	L	V	H	L	G	E	Y	Q	A	A	V	D
Template Known Secondary structure		T	T	T	S	T	T	T	S		S		S					.	.	.	.	.	.								S			S	T	T	S	S	T	T	G	G	G	S			S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S	S	S		S	G	G	G	S	S	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1185	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200							.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.																	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		W	W	K	N	Q	S	R	K	T	R	H	Q	V	A	L	Q	V	A	M	A	E	H	L	I	E	C	D	D	H	D	T	A	Q	Q	I	I	I	D	G	L	K	R	Q	Y	D	D	R	L	L	L	P	I	P	R	L	K	T	N	N	P	E	Q	L	E	K	V	L	R	Q	Q	I	K	N	V	G	D	R	P	L	L
Query Conservation
Alig confidence							.	.	.	.	.																															.
Template Conservation							.	.	.	.	.																															.
Template Sequence		G	A	R	K	A	.	.	.	.	.	N	S	T	R	T	W	K	E	V	C	F	A	C	V	D	G	K	E	F	R	L	A	Q	M	C	G	L	H	I	V	.	V	H	A	D	E	L	E	E	L	I	N	Y	Y	Q	D	R	G	Y	F	E	E	L	I	T	M	L	E	A	A	L	G	L	E	R	A	H	M	G	M
Template Known Secondary structure		T	G	G	G		.	.	.	.	.		S	S		S					T						S		T	T	T	T	T	T								.			S	S			S	G	G	G	S	S	S	T	T	T	T		G	G	G	S	T	T	T					T	T	S	T	T
Template Predicted Secondary structure							.	.	.	.	.																															.
Template SS confidence
		1243	.	.	.	.						.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.		.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.									.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		W	S	T	L	G	Q	S	L	M	K	H	G	E	W	Q	E	A	S	L	A	F	.	.	.	.	.	.	.	.	R	A	A	L	K	Q	R	P	D	A	Y	D	Y	A	W	L	A	D	A	L	D	R	L	H	K	P	E	E	A	A	A	M	R
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	E	L	A	I	L	Y	S	K	F	K	P	Q	K	M	R	E	H	L	E	L	F	W	S	R	V	N	I	P	K	V	L	R	A	A	E	Q	A	H	L	W	A	E	L	V	F	L	Y	D	K	Y	E	E	Y	D	N	A	I	I	T	M
Template Known Secondary structure											S	S		T	T							T	T	S	S	S	S	S		S	T	T	T					T	T	T	T													T								T	T
Template Predicted Secondary structure
Template SS confidence
		1317	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions