Job Description P0ACB7 Confidence 99.96% Date Thu Jan 5 11:17:50 GMT 2012 Rank 10 Aligned Residues 282 % Identity 12% Template c3hymB_ PDB info PDB header:cell cycle, ligase Chain: B: PDB Molecule:cell division cycle protein 16 homolog; PDBTitle: insights into anaphase promoting complex tpr subdomain2 assembly from a cdc26-apc6 structure Resolution 2.80 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	E	Q	A	L	L	K	L	A	E	G	D	Y	Q	Q	V	E	K	L	M	A	K	N	A	D	H	A	E	Q	P	V	V	N	Y	L	L	A	A	E	A	A	Q	Q	R	G	D	E	A	R	A	N	Q	H	L	E	R	A	A	E	L	A	G	N	D	T	I	P	V	E	I	T	R	V	R	L	Q	L	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	S	L	A	E	R	H	Y	Y	N	C	D	F	K	X	C	Y	K	L	T	S	V	V	X	E	K	D	P	F	H	A	S	C	L	P	V	H	I	G	T	L	V	E	L	N	K	A	N	E	L	F	Y	L	S	H	K	L	V	D	L	Y	P	S	N	P	V	S	W	F	A	V	G	C	Y	Y	L	X	V	G
Template Known Secondary structure												T	T																	T	T		T	T	T												T																	T	T	S	T													S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	N	H	A	A	R	H	G	V	D	K	L	L	E	V	T	P	R	H	P	E	V	L	R	L	A	E	Q	A	Y	I	R	T	G	A	W	S	S	L	L	D	I	I	P	S	M	A	K	A	H	V	G	D	E	E	H	R	A	M	L	E	Q	Q	A	W	I	G	L	M	D	Q	A	R	A	D	N	G	S	E
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.
Template Sequence		H	K	N	E	H	A	R	R	Y	L	S	K	A	T	T	L	E	K	T	Y	G	P	A	W	I	A	Y	G	H	S	F	A	V	E	S	E	H	D	Q	A	X	A	A	Y	F	T	A	A	Q	L	X	K	G	C	H	L	P	X	L	Y	I	.	.	.	.	.	.	.	.	G	L	E	Y	G	L	T	N	N	S	K
Template Known Secondary structure		S														T	T		T	T		T														T																T	T	T		S							.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.									.	.	.	.	.	380	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.													.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	R	N	W	W	K	N	Q	S	R	K	T	R	H	Q	V	A	L	Q	V	A	M	A	E	H	L	I	E	C	D	D	H	D	T	A	Q	Q	I	I	I	D	G	L	K	R	Q	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	D	R	L	L	L	P	I	P	R	L	K	T	N	N	P	E	Q	L	E
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	E	R	F	F	S	Q	A	L	S	I	A	P	E	D	P	F	V	X	H	E	V	G	V	V	A	F	Q	N	G	E	W	K	T	A	E	K	W	F	L	D	A	L	E	K	I	K	A	I	G	N	E	V	T	V	D	K	W	E	P	L	L	N	N	L	G	H	V	C	R	K	L	K	K	Y	A	E	A	L
Template Known Secondary structure												T	T		T	T															T	T																	T	T	T	S		S		T	T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.
Predicted Secondary structure																																															.															.
Query SS confidence																																															.															.
Query Sequence		K	V	L	R	Q	Q	I	K	N	V	G	D	R	P	L	L	W	S	T	L	G	Q	S	L	M	K	H	G	E	W	Q	E	A	S	L	A	F	R	A	A	L	K	Q	R	P	.	D	A	Y	D	Y	A	W	L	A	D	A	L	D	R	.	L	H	K
Query Conservation																																															.															.
Alig confidence																																															.															.
Template Conservation
Template Sequence		D	Y	H	R	Q	A	L	V	L	I	P	Q	N	A	S	T	Y	S	A	I	G	Y	I	H	S	L	X	G	N	F	E	N	A	V	D	Y	F	H	T	A	L	G	L	R	R	D	D	T	F	S	V	T	X	L	G	H	C	I	E	X	Y	I	G	D
Template Known Secondary structure											S	T	T		S														T											T	T	T	T	T		S															T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions