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Job DescriptionP0ACB7
Confidence97.91%DateThu Jan 5 11:17:50 GMT 2012
Rank106Aligned Residues252
% Identity16%Templatec3e4bD_
PDB info PDB header:protein bindingChain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100. ........110.........120.........130.. .......140.........150.........160
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Query Sequence  KQTEQALLKLAEGDYQ. . . . QVEKLMAKNADHAEQPVVNYLLAAEAAQQRG. DEARANQHLERAAELAGNDTIPVEITRV
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Template Sequence  AGLAQVLLYRTQGTYDQHLDDVERICKAALNTTDI. . . CYVELATVYQKQPEQQAELLKQMEAGVSRGTVTAQRVDSVAR
Template Known Secondary structure  S
TTT
TTT
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GGGT
S
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   143......150.........160.........170....... ..180.........190.........200.........210.........
 
   161........170.........180.........190.........200... ......210.........220.........230.......
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Query Sequence  RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAW. . . SSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMD
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Template Sequence  VLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
TTSSS

TTTST
TTS

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   222.......230.........240.........250.........260.........270.........280
 
   238.240.........250.........260.........270...... ...280.........290.........300...... ...
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Query Sequence  QARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIEC. . . . DDHDTAQQIIIDGLKRQYDDRLLLPIPRLK. . . . TNN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . DQPRAELLLGKLYYEGKWVPADAKAAEAHFEKAVGREVAADYYLGQIYRRGYLGKVY
Template Known Secondary structure  .......................T

SSS


TTTTT
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   281........290.........300.........310.........320.........330.......
 
   310.........320.........330.........340 .........350.........360.........370..... ....380...
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Query Sequence  PEQLEKVLRQQIKNVGDRPLLWSTLGQSLMK. . . . HGEWQEASLAFRAALKQRPDAYDYAWLADALDRLH. . KPEEAAAM
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Template Sequence  PQKALDHLLTAARN. . GQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLA. . . KATPEANDLATQLEAPLTPAQRAEGQRL
Template Known Secondary structure  T..T
TTTTS
TTS


T...T

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   338.340.........350. ........360.........370.........380.... .....390.........400.........410..
 
   384.....
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Query Sequence  RRDGLM
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Template Conservation        
Template Sequence  VQQELA
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   415....420
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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