Job Description P0ACB7 Confidence 99.87% Date Thu Jan 5 11:17:50 GMT 2012 Rank 20 Aligned Residues 243 % Identity 10% Template c3draA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein PDBTitle: candida albicans protein geranylgeranyltransferase-i2 complexed with ggpp Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																						.	.																								.	.	.
Query SS confidence																																																						.	.																								.	.	.
Query Sequence		K	R	R	R	A	R	K	Q	T	E	Q	A	L	L	K	L	A	E	G	D	Y	Q	Q	V	E	K	L	M	A	K	N	A	D	H	A	E	Q	P	V	V	N	Y	L	L	A	A	E	A	A	Q	Q	R	.	.	G	D	E	A	R	A	N	Q	H	L	E	R	A	A	E	L	A	G	N	D	T	I	P	.	.	.
Query Conservation																																																						.	.																								.	.	.
Alig confidence																																																						.	.																								.	.	.
Template Conservation
Template Sequence		D	E	D	Y	K	Q	I	M	G	L	L	L	A	L	M	K	A	E	E	Y	S	E	R	A	L	H	I	T	E	L	G	I	N	E	L	A	S	H	Y	T	I	W	I	Y	R	F	N	I	L	K	N	L	P	N	R	N	L	Y	D	E	L	D	W	C	E	E	I	A	L	D	N	E	K	N	Y	Q	I	W	N	Y
Template Known Secondary structure																		T	T			S															T	T														T		T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
					155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																														.	.
Query SS confidence		.	.	.																																														.	.
Query Sequence		.	.	.	V	E	I	T	R	V	R	L	Q	L	A	R	N	E	N	H	A	A	R	H	G	V	D	K	L	L	E	V	T	P	R	H	P	E	V	L	R	L	A	E	Q	A	Y	I	R	.	.	T	G	A	W	S	S	L	L	D	I	I	P	S	M	A	K	A	H	V	G	D	E	E	H	R	A	M	L	E	Q
Query Conservation		.	.	.																																														.	.
Alig confidence		.	.	.																																														.	.
Template Conservation
Template Sequence		R	Q	L	I	I	G	Q	I	M	E	L	N	N	N	D	F	D	P	Y	R	E	F	D	I	L	E	A	M	L	S	S	D	P	K	N	H	H	V	W	S	Y	R	K	W	L	V	D	T	F	D	L	H	N	D	A	K	E	L	S	F	V	D	K	V	I	D	T	D	L	K	N	N	S	A	W	S	H	R	F	F
Template Known Secondary structure													T	T	T				T															T	T															T	T		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	W	I	G	L	M	D	Q	A	R	A	D	N	G	S	E	G	L	R	N	W	W	K	N	Q	S	R	K	T	R	H	Q	V	A	L	Q	V	A	M	A	E	H	L	I	E	C	D	D	H	D	T	A	Q	Q	I	I	I	D	G	L	K	R	Q	Y	D	D	R	L	L	L	P	I	P	R	L	K	T	N	N
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	K	H	L	A	T	D	N	T
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.																																																																				.	.	.	.	.	.	.	.	200	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.					.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																			.
Query SS confidence																																		.	.	.	.																			.
Query Sequence		P	E	Q	L	E	K	V	L	R	Q	Q	I	K	N	V	G	D	R	P	L	L	W	S	T	L	G	Q	S	L	M	K	H	.	.	.	.	G	E	W	Q	E	A	S	L	A	F	R	A	A	L	K	Q	R	P	.	D	A	Y	D	Y	A	W	L	A	D	A	L	D	R	L	H	K	P	E	E	A	A	A	M	R
Query Conservation																																		.	.	.	.																			.
Alig confidence																																		.	.	.	.																			.
Template Conservation
Template Sequence		I	D	E	E	L	N	Y	V	K	D	K	I	V	K	C	P	Q	N	P	S	T	W	N	Y	L	L	G	I	H	E	R	F	D	R	S	I	T	Q	L	E	E	F	S	L	Q	F	V	D	L	E	K	D	Q	V	T	S	S	F	A	L	E	T	L	A	K	I	Y	T	Q	Q	K	K	Y	N	E	S	R	T	V	Y
Template Known Secondary structure																	S	S															T	T			G	G	G	G						T	T			G	G	G	T			S															T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		385	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	G	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	L	K	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions