Job Description P0ACB7 Confidence 26.55% Date Thu Jan 5 11:17:50 GMT 2012 Rank 146 Aligned Residues 188 % Identity 15% Template c2wpvG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:upf0363 protein yor164c; PDBTitle: crystal structure of s. cerevisiae get4-get5 complex Resolution 1.99 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.																													.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.																													.	.	.	.	.
Query Sequence		I	T	R	V	R	L	Q	L	A	R	N	E	N	H	A	A	R	H	G	V	D	K	L	L	E	V	T	P	R	H	.	.	.	.	.	.	P	E	V	L	R	L	A	E	Q	A	Y	I	R	T	G	A	W	S	S	L	L	D	I	I	P	S	M	A	.	.	.	.	.	K	A	H	V	G	D	E	E	H	R	A
Query Conservation																																.	.	.	.	.	.																													.	.	.	.	.
Alig confidence																																.	.	.	.	.	.																													.	.	.	.	.
Template Conservation
Template Sequence		L	Q	R	F	E	N	K	I	K	A	G	D	Y	Y	E	A	H	Q	T	L	R	T	I	A	N	R	Y	V	R	S	K	S	Y	E	H	A	I	E	L	I	S	Q	G	A	L	S	F	L	K	A	K	Q	G	G	S	G	T	D	L	I	F	Y	L	L	E	V	Y	D	L	A	E	V	K	V	D	D	I	S	V	A
Template Known Secondary structure											T	T																			T	T																			T	T																			T	T				S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	Q	Q	A	W	I	G	L	M	D	Q	A	R	A	D	N	G	S	E	G	L	R	N	W	W	K	N	Q	S	R	K	T	R	H	Q	V	A	L	Q	V	A	M	A	E	H	L	I	E	C	D	D	H	D	T	A	Q	Q	I	I	I	D	G	L	K	R	Q	Y	D	D	R	L	L	L	P	I	P	R	L
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		R	L	V	R	L	I	A	E	L	D	P	S	E	P	N	L	K	D	V	I	T	G	M	N	N	W	S	I	K	F	S	E	Y	K	F	G	D	P	Y	L	H	N	T	I	G	S	K	L	L	E	G	D	F	V	Y	E	A	E	R	Y	F	M	L	G	T	H	D	S	M	I	K	Y	V	D	L	L	.	.	.	.
Template Known Secondary structure										S		T	T		T	T															T	S	S		T	T																T	T											T	S													.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		K	T	N	N	P	E	Q	L	E	K	V	L	R	Q	Q	I	K	N	V	G	D	R	P	L	L	W	S	T	L	G	Q	S	.	L	M	K	H	G	E	W	Q	E	A	S	L	A	F	R	A	A	L	K
Query Conservation																																		.
Alig confidence		.	.	.	.	.	.	.	.																									.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	W	D	W	L	C	Q	V	D	D	I	E	D	S	T	V	A	E	F	F	S	R	L	V	F	N	Y	L	F	I	S	N	I	S	F	A	H	E	S	K	D	I	F	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.							T	T																					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions