 |
Job Description | P0ACB7 | Confidence | 54.17% | Date | Thu Jan 5 11:17:50 GMT 2012 |
Rank | 131 | Aligned Residues | 30 |
% Identity | 27% | Template | c2v6xA_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 4; |
PDBTitle: stractural insight into the interaction between escrt-iii2 and vps4
|
Resolution | 1.98 Å |
|
  |   |
361 | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Y | D | Y | A | W | L | A | D | A | L | D | R | L | H | K | P | E | E | A | A | A | M | R | R | D | G | L | M | L |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |
Template Sequence |   |
G | I | E | L | V | Q | K | A | I | D | L | D | T | A | T | Q | Y | E | E | A | Y | T | A | Y | Y | N | G | L | D | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|