Job Description P0ACB7 Confidence 99.88% Date Thu Jan 5 11:17:50 GMT 2012 Rank 18 Aligned Residues 209 % Identity 16% Template c2ho1B_ PDB info PDB header:protein binding Chain: B: PDB Molecule:type 4 fimbrial biogenesis protein pilf; PDBTitle: functional characterization of pseudomonas aeruginosa pilf Resolution 2.00 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	R	R	A	R	K	Q	T	E	Q	A	L	L	K	L	A	E	G	D	Y	Q	Q	V	E	K	L	M	A	K	N	A	D	H	A	E	Q	P	V	V	N	Y	L	L	A	A	E	A	A	Q	Q	R	G	D	E	A	R	A	N	Q	H	L	E	R	A	A	E	L	A	G	N	D	T	I	P	V	E	I	T	R
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		R	D	E	A	R	D	A	Y	I	Q	L	G	L	G	Y	L	Q	R	G	N	T	E	Q	A	K	V	P	L	R	K	A	L	E	I	D	P	S	S	A	D	A	H	A	A	L	A	V	V	F	Q	T	E	X	E	P	K	L	A	D	E	E	Y	R	K	A	L	A	S	D	S	R	N	A	R	.	V	L	N	N	Y
Template Known Secondary structure																		T	T	T																	T	T															T	T															S	S	S					.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		1033	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.		.	.	.	1110	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	L	Q	L	A	R	N	E	N	H	A	A	R	H	G	V	D	K	L	L	E	V	T	P	R	H	P	E	V	L	R	L	A	E	Q	A	Y	I	R	T	G	A	W	S	S	L	L	D	I	I	P	S	M	A	K	A	H	V	G	D	E	E	H	R	A	M	L	E	Q	Q	A	W	I	G	L	M	D	Q	A
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	F	L	Y	E	Q	K	R	Y	E	E	A	Y	Q	R	L	L	E	A	S	Q	D	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T													T	T		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1112	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	N	G	S	E	G	L	R	N	W	W	K	N	Q	S	R	K	T	R	H	Q	V	A	L	Q	V	A	M	A	E	H	L	I	E	C	D	D	H	D	T	A	Q	Q	I	I	I	D	G	L	K	R	Q	Y	D	D	R	L	L	L	P	I	P	R	L	K	T	N	N	P	E	Q	L	E	K	V	L	R	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	E	R	S	R	V	F	E	N	L	G	L	V	S	L	Q	X	K	K	P	A	Q	A	K	E	Y	F	E	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																				1137	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		Q	I	K	N	V	G	D	R	P	L	L	W	S	T	L	G	Q	S	L	M	K	H	G	E	W	Q	E	A	S	L	A	F	R	A	A	L	K	Q	R	P	.	D	A	Y	D	Y	A	W	L	A	D	A	L	D	R	L	H	K	P	E	E	A	A	A	M	R	R	D	G	L	M	L	T	L	Q	N
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		S	L	R	L	N	R	N	Q	P	S	V	A	L	E	X	A	D	L	L	Y	K	E	R	E	Y	V	P	A	R	Q	Y	Y	D	L	F	A	Q	G	G	G	Q	N	A	R	S	L	L	L	G	I	R	L	A	K	V	F	E	D	R	D	T	A	A	S	Y	G	L	Q	L	K	R	L	Y	P	G	S
Template Known Secondary structure							S																T	T														T	T																		T	T																	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1167	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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