Job Description P0ACB7 Confidence 99.61% Date Thu Jan 5 11:17:50 GMT 2012 Rank 42 Aligned Residues 264 % Identity 16% Template c1xi4D_ PDB info PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:clathrin heavy chain; PDBTitle: clathrin d6 coat Resolution 7.90 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	Y	Q	Q	V	E	K	L	M	A	K	N	A	D	H	A	E	Q	P	V	V	N	Y	L	L	A	A	E	A	A	Q	Q	R	G	D	E	A	R	A	N	Q	H	L	E	R	A	A	E	L	A	G	N	D	T	I	P	V	E	I	T	R	V	R	L	Q	L	A	R	N	E	N	H	A	A	R	H	G	V	D
Query Conservation
Alig confidence													.	.	.	.	.																																.	.	.	.	.	.
Template Conservation													.	.	.	.	.																																.	.	.	.	.	.
Template Sequence		G	N	L	D	R	A	Y	E	F	A	E	.	.	.	.	.	R	C	N	E	P	A	V	W	S	Q	L	A	K	A	Q	L	Q	K	G	M	V	K	E	A	I	D	S	Y	I	K	A	.	.	.	.	.	.	D	D	P	S	S	Y	M	E	V	V	Q	A	A	N	T	S	G	N	W	E	E	L	V	K	Y	L	Q
Template Known Secondary structure													.	.	.	.	.	T		S		T															S	T	T	T							T	S	.	.	.	.	.	.							T									T	T
Template Predicted Secondary structure													.	.	.	.	.																																.	.	.	.	.	.
Template SS confidence
		1090	.	.	.	.	.	.	.	.	.	1100						.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.							.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	L	E	V	T	P	R	H	P	E	V	L	R	L	A	E	Q	A	Y	I	R	T	G	A	W	S	S	L	L	D	I	I	P	S	M	A	K	A	H	V	G	D	E	E	H	R	A	M	L	E	Q	Q	A	W	I	G	L	M	D	Q	A	R	A	D	N	G	S	E	G	L	R	N	W	W	K	N	Q	S	R
Query Conservation
Alig confidence										.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	R	K	K	A	R	E	.	S	Y	V	E	T	E	L	I	F	A	L	A	K	T	N	R	L	A	E	L	E	E	F	I	N	G	P	N	N	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	Q	V	G	D	R	C	Y	D	E	K	M	Y	D	A	A	K	L	L	Y	N	N	V	S	N
Template Known Secondary structure				T	T	T				.	T	T											S	S	S											S				S		.	.	.	.	.	.	.	.	.	.	.	.	.	.												T											T	T	T
Template Predicted Secondary structure										.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1159	1160	.	.	.	.	.	.		.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.															.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																													.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	R	H	Q	V	A	L	Q	V	A	M	A	E	H	L	I	E	C	D	D	H	D	T	A	Q	Q	I	I	I	D	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	Q	Y	D	D	R	L	L	L	P	I	P	R	L	K	T	N	N
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	F	G	R	L	A	S	T	L	V	H	L	G	E	Y	Q	A	A	V	D	G	A	R	K	A	N	S	T	R	T	W	K	E	V	C	F	A	C	V	D	G	K	E	F	R	L	A	Q	M	C	G	L	H	I	V	V	H	A	D	E	L	E	E	L	I	N	Y	Y	Q	D	R	G	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.											T	T												T	T	S	S		T											T	T								T		S												S	S	S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										1224	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.							360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																	.	.																				.	.	.	.	.	.
Query SS confidence																																	.	.																				.	.	.	.	.	.
Query Sequence		P	E	Q	L	E	K	V	L	R	Q	Q	I	K	N	V	G	D	R	P	L	L	W	S	T	L	G	Q	S	L	M	K	.	.	H	G	E	W	Q	E	A	S	L	A	F	R	A	A	L	K	Q	R	P	.	.	.	.	.	.	D	A	Y	D	Y	A	W	L	A	D	A	L	D	R	L	H	K	P	E	E	A	A
Query Conservation																																	.	.																				.	.	.	.	.	.
Alig confidence																																	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	E	L	I	T	M	L	E	A	A	L	G	L	E	R	A	H	M	G	M	F	T	E	L	A	I	L	Y	S	K	F	K	P	Q	K	M	R	E	H	L	E	L	F	W	S	R	V	N	I	P	K	V	L	R	A	A	E	Q	A	H	L	W	A	E	L	V	F	L	Y	D	K	Y	E	E	Y	D	N	A	I
Template Known Secondary structure										T	T	T	T	T	S	S	S																		G	G	G					T	T	S	S	G	G	G	S		S											T												T	T
Template Predicted Secondary structure
Template SS confidence
		1296	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	R	R	D	G	L	M	L	T	L	Q	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	M	M	N	H	P	T	D	A	W	K	E	G
Template Known Secondary structure							S							T	T
Template Predicted Secondary structure
Template SS confidence
		1376	.	.	.	1380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions