Return to main results Retrieve Phyre Job Id

Job DescriptionP39274
Confidence99.08%DateThu Jan 5 11:58:44 GMT 2012
Rank45Aligned Residues78
% Identity10%Templatec3fynA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20...... ...30.........40.........50.........60.........70........
Predicted Secondary structure 






.....











Query SS confidence 






















. . . . .



















































Query Sequence  REGHNKFYINDKQGKQIAEIVFV. . . . . PTGENLAIIEHTDVDESLKGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHE
Query Conservation          
   

  

     .....        
    
 
  

 


  
       

  
  

  
 

   
Alig confidence 






















.....














































...

Template Conservation          
      


                  
  
 
 
  

 


  

      
   
   
 
 
...  
Template Sequence  KPDLGRIWLIAEGTESVGYIVLTLGFSXEYGGLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVET. . . GV
Template Known Secondary structure 
GGGTTTTTT
GGGTTSSTT





...
Template Predicted Secondary structure 


























...
Template SS confidence 















































































   46...50.........60.........70.........80.........90.........100.........110.........120 ..
 
   7980....
Predicted Secondary structure 


Query SS confidence 





Query Sequence  FDKTRE
Query Conservation 
 

  
Alig confidence 





Template Conservation 
   

Template Sequence  YSRAGF
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 





   131.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions