Return to main results Retrieve Phyre Job Id

Job DescriptionP37013
Confidence99.43%DateThu Jan 5 11:54:23 GMT 2012
Rank63Aligned Residues225
% Identity17%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190.........200.........210.........220.........230... ......240.........250...
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Query Sequence  PFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASP. . . . RAVNPLVYLNCAALPESVAE
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Template Sequence  KYRPKNLDEVTAQDHAVTVLKKTLKS. . ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVR
Template Known Secondary structure  T

SSTTT

S

TTTT
..TT



STTSSTTS
SSS


T
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   30.........40.........50..... ....60.........70.........80.........90.........100.......
 
   254.....260.........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  SELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLRE
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Template Sequence  EKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS. . . . . . . . . . . GVTRFCLICNYVTR.
Template Known Secondary structure  TS





TTS


S
TTGGGS
TT...........TTS
GGG.
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   108.110.........120.........130.........140.........150.........160. ........170.....
 
   334.....340.........350.........360.........370.........380.........390.........400.........410...
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Query Sequence  EVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHR
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Template Sequence  . . . . . . IIDPLASQCSKFRFKALDASNAIDRLRFISEQ. . . . . . . . . . . ENVKCDDGVLERILDI. SAGDLRRGITLLQS
Template Known Secondary structure  ......S
S




T...........TT



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   176...180.........190.........200....... ..210.........220... ......230.......
 
   414.... .420.........430....
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Query Sequence  AVVLA. . . . RATRSGDEVILEAQHF
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Template Sequence  ASKGAQYLGDGKNITSTQVEELAGV
Template Known Secondary structure  T
S




T
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   238.240.........250.........260..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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