Return to main results Retrieve Phyre Job Id

Job DescriptionP37013
Confidence98.64%DateThu Jan 5 11:54:23 GMT 2012
Rank130Aligned Residues193
% Identity25%Templated1r7ra3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.........200....... ..210.........220.........230.........240........
Predicted Secondary structure 















...........


















Query SS confidence 



























. . . . . . . . . . .








































Query Sequence  EAVKQTQMIGLSPGMTQLKKEIEIVAAS. . . . . . . . . . . DLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALP
Query Conservation         


 
             
  ...........  



 

 



   
  

  
       
   
    
Alig confidence 



























...........



























...







..
Template Conservation 
      
 
    
  
   
   
         
      


 

 




 

  

      ...        ..
Template Sequence  PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN. . . FISIKGPE. .
Template Known Secondary structure 


S
SS
SSSS



T







B

TTSSTT
...
..
Template Predicted Secondary structure 






















...

..
Template SS confidence 















































































   472.......480.........490.........500.........510.........520.........530........ .540......
 
   249250.........260.........270.........280.........290....... ..300.........310........
Predicted Secondary structure 
























..........







Query SS confidence 
















































. . . . . . . . . .




















Query Sequence  ESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQA. . . . . . . . . . KLLRVLQYGDIQRVGDDRCLR
Query Conservation         


                   
  


 
  
  
    
 .......... 
   
               
Alig confidence  .......









































..........









...........
Template Conservation  .......                          

 


 
 
                          ...........
Template Sequence  . . . . . . . LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEM. . . . . . . . . . .
Template Known Secondary structure  .......TS
TTTT
SSSGGGT




TTT
...........
Template Predicted Secondary structure  .......
















...........
Template SS confidence 















































































   547..550.........560.........570.........580.........590.........600........
 
   319320.........330.. .......340.........350.........360.........370.........380.........390.....
Predicted Secondary structure 




...


















Query SS confidence 













. . .






























































Query Sequence  VDVRVLAATNRDLR. . . EEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLL
Query Conservation     
 
  
   
 ...           
   
    
 






 


  
    
              
  
   
Alig confidence 













...










.......












........












....






Template Conservation      

  

             

   .......
    
    
  ........
    
      
....  

  
Template Sequence  DNVFIIGATNRPDIIDPAILRPGRLDQL. . . . . . . IYIPLPDEKSRVA. . . . . . . . ILKANLRKSDVDL. . . . EFLAKMT
Template Known Secondary structure 




BS
TTTS
GGGSSTTS.......





........TT





....
Template Predicted Secondary structure 














.......




........






....
Template SS confidence 















































































   609610.........620.........630...... ...640......... 650.........660.. .......
 
   396...400.........410........
Predicted Secondary structure 







Query SS confidence 






















Query Sequence  QHYSFPGNVRELEHAIHRAVVLA
Query Conservation    
 



  

           
Alig confidence 


....















Template Conservation   
 ....
  

  

  
   
Template Sequence  NGF. . . . SGADLTEICQRACKLA
Template Known Secondary structure 
SS....

Template Predicted Secondary structure 


....
Template SS confidence 






















   680.. .......690........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions