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Job DescriptionP37013
Confidence98.93%DateThu Jan 5 11:54:23 GMT 2012
Rank114Aligned Residues213
% Identity23%Templated1ixza_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PFEAVKQTQMIGLSPGMTQLKKEIEIVA. . . . . . . . . . ASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAAL
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Template Sequence  EAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAV. . . AGEARVPFITASGSD.
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S

GGG

S

TT



S

TTSS...TT

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   149150.........160.........170.........180.........190.........200......... 210.........220....
 
   248.250.........260.........270.........280.........290 .........300.........310.........320..
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Query Sequence  PESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGE. . . . . LSLALQAKLLRVLQYGDIQRVGDDRCLRVDVR
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Template Sequence  . . . . . . . . FVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMDG. . . . . . . . . FEKDTAIV
Template Known Secondary structure  ........S
TTTTSSST

T.........

TT

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   323......330.. .......340.........350.........360.........370.........380.........390........
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Query Sequence  VLAATNRDLR. . . EEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHY.
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Template Sequence  VMAATNRPDILDPALLRPGRFDRQ. . . . . . . IAIDAPDVKGREQ. . . . ILRIHA. . . . . . . . RGKPLAEDVDLALLAKRT
Template Known Secondary structure  S
GGGS
GGGGSTTSS
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S

............TTS
B
TT

T
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   297..300.........310.........320 .........330... ...... 340.........350.......
 
   399400.........410......... 420.........430..
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Query Sequence  . SFPGNVRELEHAIHRAVVLAR. . . ATRSGDEVILEAQ
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Template Sequence  PGFVG. . ADLENLLNEAALLAAREGRRKITMKDLEEAA
Template Known Secondary structure  TT

..TT
SSB
T
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   358.360.. .......370.........380.........390...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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