Return to main results Retrieve Phyre Job Id

Job DescriptionP37013
Confidence99.74%DateThu Jan 5 11:54:23 GMT 2012
Rank17Aligned Residues161
% Identity17%Templatec3trcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase; PDBTitle: structure of the gaf domain from a phosphoenolpyruvate-protein2 phosphotransferase (ptsp) from coxiella burnetii
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50 .........60.........70.........80.
Predicted Secondary structure 







..














Query SS confidence 














































. .






























Query Sequence  SVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQ. . FIPLAIDGLAKDVLGRRFALEGHPRLEAIAR
Query Conservation 

  
  

  
 
 
   
 
  

  
  

  
   
 
 
   ..    
                       
  
Alig confidence 














































..






























Template Conservation   
  
  
   
        

                 
 
 
                                    
Template Sequence  XLKILRQITQEVNAAPNLEQALKLVVVRLCEALPADACSLFICDDVHGEYVLXATQGLNSKQVGKLRLKFGEGLIGLVGE
Template Known Secondary structure 
SSTT
STTTTSS
GGGTTT
TT
Template Predicted Secondary structure 





























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  AGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNAL
Query Conservation        
 
                     
 
 


   
  



 
 
     
   
  

  

   
 

 

 
Alig confidence 


















..


























































Template Conservation                     ..         
 
  

       
 
         
   
   
  

   
 

 


Template Sequence  REEPINLADAPLHPAYKHR. . PELGEEDYHGFLGIPIIEQGELLGILVIQQLESHHFAEEEEAFCVTLAIHLAAEIAHAR
Template Known Secondary structure  TS
S
GGGSTT



..GGG





TTSSS



Template Predicted Secondary structure 










..





















Template SS confidence 















































































   83......90.........100. ........110.........120.........130.........140.........150.........160
 
   162....
Predicted Secondary structure 




Query SS confidence 




Query Sequence  LIEQL
Query Conservation 
 
 
Alig confidence 




Template Conservation 
 
 
Template Sequence  AKGAL
Template Known Secondary structure  TT

Template Predicted Secondary structure 

Template SS confidence 




   161....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions