Job Description P37013 Confidence 97.49% Date Thu Jan 5 11:54:23 GMT 2012 Rank 144 Aligned Residues 196 % Identity 21% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		I	E	I	V	A	A	S	D	L	N	V	L	I	S	G	E	T	G	T	G	K	E	L	V	A	K	A	I	H	E	A	S	P	R	A	V	N	P	L	V	Y	L	N	C	A	A	.	L	P	E	S	V	A	E	S	E	L	F	G	H	V	K	G	A	F	T	G	A	I	S	N	R	S	G	K	F	E	M	A	D
Query Conservation																																																.
Alig confidence																														.	.	.																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	D	S	L	H	Q	K	Y	G	G	C	F	F	G	P	A	G	T	G	K	T	E	T	V	K	A	F	.	.	.	G	Q	N	L	G	R	V	V	V	V	F	N	C	D	D	S	F	D	Y	Q	V	L	S	R	L	L	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	Q	I
Template Known Secondary structure								T	T	T	T							T	T	S	S									.	.	.	T	S	S											S	S	S	S		S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																														.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1782	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.				1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.																		.	.	1840	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																			.	.	.	.	.	.	.												.	.
Query SS confidence																			.	.	.	.	.	.	.												.	.
Query Sequence		N	G	T	L	F	L	D	E	I	G	E	L	S	L	A	L	Q	.	.	.	.	.	.	.	A	K	L	L	R	V	L	Q	Y	G	D	.	.	I	Q	R	V	G	D	D	R	C	L	R	V	D	V	R	V	L	A	A	T	N	R	D	L	R	E	E	V	L	A	G	R	F	R	A	D	L	F	H	R	L	S	V
Query Conservation																			.	.	.	.	.	.	.												.	.
Alig confidence																			.	.	.	.	.	.	.												.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	W	G	C	F	D	E	F	N	R	L	D	E	K	V	L	S	A	V	S	A	N	I	Q	Q	I	Q	N	G	L	Q	V	G	K	S	H	I	T	L	L	E	E	E	T	P	L	S	P	H	T	A	V	F	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	N	L	K	K	S	F	R	E
Template Known Secondary structure									T	T	T	T	S	S																	T	S	T	T	S	S	S						S	S															.	.	.	.	.	.	.	.	.	.	.	.							T	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1842	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.													.	1900	.	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		F	P	L	S	V	P	P	L	R	E	R	G	D	D	V	I	L	L	A	G	Y	F	C	E	.	.	Q	C	R	L	R	Q	G	L	S	R	V	V	L	S	A	G	A	R	N	L	L	Q	H	Y	S	F	P	G	N	V	R	E	L	E	H	A	I	H	R	A	V	V	L	A	R	A	T	R	S	G	D	E	V	I
Query Conservation																										.	.
Alig confidence					.					.																.	.										.																		.	.
Template Conservation					.					.																											.																		.	.
Template Sequence		F	S	M	.	K	S	Q	S	.	G	T	I	A	E	M	I	L	Q	I	M	G	F	E	D	S	K	S	L	A	S	K	I	V	H	F	.	L	E	L	L	S	S	K	C	S	S	M	N	H	Y	H	F	G	.	.	L	R	T	L	K	G	V	L	R	N	C	S	P	L	I	S	E	F	G	E	G	E	K	T	V
Template Known Secondary structure					.					.													T	S	S												.										S	S	S						.	.																		S	S		S	S
Template Predicted Secondary structure					.					.																											.																		.	.
Template SS confidence
		1919	1920	.		.	.	.	.		.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.		.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.			.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.
		429	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	S	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1995	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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