Job Description P37013 Confidence 98.67% Date Thu Jan 5 11:54:23 GMT 2012 Rank 129 Aligned Residues 190 % Identity 21% Template c3pxgA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca121 and clpc1-485 complex Resolution 3.65 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	Q	T	Q	M	I	G	L	S	P	G	M	T	Q	L	K	K	E	I	E	I	V	A	A	S	D	L	N	V	L	I	S	G	E	T	G	T	G	K	E	L	V	A	K	A	I	H	E	A	S	P	R	A	V	N	P	L	V	Y	L	N	C	A	A	L	P	E	S	V	A	E	S	E	L	F	G	H	V
Query Conservation
Alig confidence																									.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	S	L	D	P	V	I	G	R	S	K	E	I	Q	R	V	I	E	V	L	S	R	.	.	R	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	A	E	G	L	A	Q	Q	I	I	N	N	E	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	L	R	D	K	R
Template Known Secondary structure		S	S		S																				.	.	S	S	S							S		T	T	T	T	T													S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S	S
Template Predicted Secondary structure																									.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.																.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	F	T	G	A	I	S	N	R	S	G	K	F	E	M	A	D	N	G	T	L	F	L	D	E	I	G	E	L	S	L	A	L	Q	A	K	L	L	R	V	L	Q	Y	G	D	I	Q	R	V	G	D	D	R	C	L	R	V	D	V	R	V	L	A	A	T	N	R	D	L	R	E	E	V	L	A	G	R	F
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		V	M	T	L	E	D	R	L	K	K	V	M	D	E	I	R	Q	A	G	N	I	I	L	F	I	D	A	K	P	S	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	E	L	Q	C	I	G	A	T	T	L	D	E	Y	R	K	Y	I	E	K	.	.
Template Known Secondary structure							T	T										T														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S									T	T	T	T					T	T	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																										.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.																.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		R	A	D	L	F	H	R	L	S	V	F	P	L	S	V	P	P	L	R	E	R	G	D	D	V	I	L	L	A	G	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	Q	C	R	L	R	Q	G	L	S	R	V	V	L	S	A	G	A	R	N	L	L	Q	H	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.														.	.	.	.	.	.	.	.
Template Conservation																																																												.
Template Sequence		D	A	A	L	E	R	R	F	Q	P	I	Q	V	D	Q	P	S	V	D	E	S	I	Q	I	L	Q	G	L	R	D	R	Y	E	A	H	H	R	V	S	I	T	D	D	A	I	E	A	A	V	K	L	S	D	R	Y	I	S	D	.	R	F	L	P	D	K	A	I	D	L	I	D	E	A	G	S	K	V	R	L	R
Template Known Secondary structure			S					S																					T	T	T	T	S	G	G	G	S	S		S																S	S			.	S		T	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
			398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Y	S	F	P	G	N	V	R	E	L	E	H	A	I	H	R	A	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		S	F	T	T	P	P	N	L	K	E	L	E	Q	K	L	D	E	V	R
Template Known Secondary structure		T	T	S			S	S	T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions