Job Description P37013 Confidence 99.59% Date Thu Jan 5 11:54:23 GMT 2012 Rank 40 Aligned Residues 141 % Identity 11% Template c3o5yA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sensor protein; PDBTitle: the crystal structure of the gaf domain of a two-component sensor2 histidine kinase from bacillus halodurans to 2.45a Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		I	G	H	Q	D	R	F	Q	R	L	I	T	T	L	R	Q	V	L	E	C	D	A	S	A	L	L	R	Y	D	S	R	Q	F	I	P	L	A	I	D	G	L	A	K	D	V	L	G	R	R	F	A	.	L	E	G	H	P	R	L	E	A	I	A	R	A	G	D	V	V	R	F	P	A	D	S	E	L	P	D	P
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		X	S	L	D	D	I	I	N	N	X	I	D	K	L	K	L	L	V	H	F	D	R	I	S	F	L	L	L	A	N	E	T	L	K	L	S	H	V	Y	P	K	G	S	H	S	L	D	I	G	S	T	I	P	K	E	Q	S	L	Y	W	S	A	L	D	Q	R	Q	T	I	F	R	S	L	T	D	T	Q	D	N	F
Template Known Secondary structure																			S			S									T	T									S	T	T			S	S		T	T					S	T	T										T	S						S			T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	G	L	I	P	G	Q	E	S	L	K	V	H	A	C	V	G	L	P	L	F	A	G	Q	N	L	I	G	A	L	T	L	D	G	M	Q	P	D	Q	F	D	V	F	S	D	E	E	L	R	L	I	A	A	L	A	A	G	A	L	S	N	A	L
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		Y	E	.	.	K	Q	Y	L	A	I	L	D	L	K	S	I	L	V	I	P	I	Y	S	K	N	K	R	V	G	V	L	S	I	G	R	K	Q	Q	I	D	W	S	L	D	D	L	A	F	L	E	Q	L	T	D	H	L	A	V	S	I	E	N	V	E
Template Known Secondary structure		T	T	.	.						T	T	T												S	S											S	S																									T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		88	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions