Job Description P37013 Confidence 99.09% Date Thu Jan 5 11:54:23 GMT 2012 Rank 98 Aligned Residues 223 % Identity 19% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.												.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	A	T	P	F	E	A	V	K	Q	T	Q	M	I	G	L	S	P	G	M	T	Q	L	K	K	E	I	E	I	V	A	.	.	.	.	.	.	.	.	.	.	.	A	S	D	L	N	V	L	I	S	G	E	T	G	T	G	K	E	L	V	A	K	A	I	H	E	A	S	P	R	A	V	N	P	L	V	Y	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		M	E	V	D	E	R	P	N	V	R	Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	.	.	.	A	T	E	T	N	A	T	F	I	R	V
Template Known Secondary structure						S	S					G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S									.	.	.				T	T
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.												.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	C	A	A	L	P	E	S	V	A	E	S	E	L	F	G	H	V	K	G	A	F	T	G	A	I	S	N	R	S	G	K	F	E	M	A	D	N	G	T	L	F	L	D	E	I	G	E	L	.	.	.	.	.	.	.	.	.	.	.	S	L	A	L	Q	A	K	L	L	R	V	L	Q	Y	G	D	I	Q	R	V
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																																																														.	.	.	.	.	.
Template Sequence		V	G	S	E	.	.	.	.	.	.	.	.	.	L	V	K	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	.	.	.	.	.	.
Template Known Secondary structure			G	G	G	.	.	.	.	.	.	.	.	.	S				S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																																														.	.	.	.	.	.
Template SS confidence
		236	.	.	.										240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		G	D	D	R	C	L	R	V	D	V	R	V	L	A	A	T	N	R	D	L	R	E	E	V	L	A	G	R	F	R	A	D	L	F	H	R	.	.	.	L	S	V	F	P	L	S	V	P	P	L	R	E	R	G	D	D	V	I	L	L	A	G	Y	F	C	E	Q	C	R	L	R	Q	G	L	S	R	V	V	L	S
Query Conservation																																						.	.	.
Alig confidence																			.	.	.	.	.	.	.													.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	D	G	F	D	A	R	G	D	V	K	I	I	G	A	T	N	.	.	.	.	.	.	.	R	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	I	L	K	I	H	T	.	.	.	.	.	.	.	.	.	.	.	.	R	K	M	N	L	A	E
Template Known Secondary structure		T	T	S	S		S	S	S	S								S	.	.	.	.	.	.	.	S	G	G	G	B						S	T	T	S																						T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		B		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.								.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.													.	.	.	.	.	360	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		A	G	A	R	N	L	L	Q	H	Y	S	F	P	G	N	V	R	E	L	E	H	A	I	H	R	A	V	V	L	A	.	.	.	R	A	T	R	S	G	D	E	V	I	L	E	A	Q	H
Query Conservation																																.	.	.
Alig confidence																																.	.	.
Template Conservation
Template Sequence		D	V	N	L	E	E	I	A	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E
Template Known Secondary structure		S								T	T	S	T	T																				T	T		S	S	B
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions