Return to main results Retrieve Phyre Job Id

Job DescriptionP37013
Confidence96.66%DateThu Jan 5 11:54:23 GMT 2012
Rank151Aligned Residues160
% Identity21%Templatec3e1sA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:exodeoxyribonuclease v, subunit recd; PDBTitle: structure of an n-terminal truncation of deinococcus radiodurans recd2
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260.... .....270..
Predicted Secondary structure 






























.....







Query SS confidence 


































































. . . . .







Query Sequence  KKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAF. . . . . TGAISNRS
Query Conservation         
    



 

 



   
  

  
       
   
           


      .....        
Alig confidence 


























































.






.....







Template Conservation 
  

          
 
 





  
  
   
      
   
 
  

  
    .   
 
 
  
         
Template Sequence  QASVLDQLAGHRLVVLTGGPGTGKSTTTKAVADLAESLGLEVGLCAPTGKAARRLGEVT. GRTASTVHRLLGYGPQGFRH
Template Known Secondary structure  TT
S

TTS
TT

SS.TS
TTTTS
Template Predicted Secondary structure 













.












Template SS confidence 















































































   343......350.........360.........370.........380.........390.........400. ........410.........420.
 
   273......280.........290.........300.........310.........320.........330.........340.........350..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  GKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFP
Query Conservation       
  


 
  
  
    
  
   
                  
 
  
   
            
   
    
Alig confidence 

































..............































Template Conservation          
 







        

      .............. 






  

  
  
              
Template Sequence  NHLEPAPYDLLIVDEVSMMGDALMLSLLAAVPPG. . . . . . . . . . . . . . ARVLLVGDTDQLPPVDAGLPLLALAQAAPTIK
Template Known Secondary structure  SSSS

S
S

GGG

TTS
TT..............

TTS


SSS

S
Template Predicted Secondary structure 


















..............













Template SS confidence 















































































   422.......430.........440.........450..... ....460.........470.........480.......
 
   353......360.........370..
Predicted Secondary structure 



Query SS confidence 



















Query Sequence  LSVPPLRERGDDVILLAGYF
Query Conservation 
 






 


  
    
Alig confidence 



















Template Conservation 
    

     
      
Template Sequence  LTQVYRQAAKNPIIQAAHGL
Template Known Secondary structure 




T
Template Predicted Secondary structure 



Template SS confidence 



















   488.490.........500.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions