Job Description P37013 Confidence 93.05% Date Thu Jan 5 11:54:23 GMT 2012 Rank 281 Aligned Residues 135 % Identity 21% Template c3citB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of the gaf domain of a putative sensor histidine2 kinase from pseudomonas syringae pv. tomato Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	V	L	A	N	I	A	I	E	L	Q	R	G	I	G	H	Q	D	R	F	Q	R	L	I	T	T	L	R	Q	V	L	E	C	D	A	S	A	L	L	R	Y	D	S	R	Q	F	I	P	L	A	I	D	G	L	A	K	D	V	L	G	R	R	F	A	L	E	G	H	P	R	L	E	A	I	A	R	A	G	D
Query Conservation
Alig confidence													.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	L	L	V	D	T	G	Q	E	L	.	I	Q	L	P	P	E	A	X	R	K	C	V	L	Q	R	A	C	A	F	V	A	X	D	H	G	L	L	L	E	W	G	A	N	G	V	Q	T	T	A	R	H	G	S	K	E	R	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													.	T	T	S																	T	T		S																			S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																					.												.
Query SS confidence																																					.												.
Query Sequence		V	V	R	F	P	A	D	S	E	L	P	D	P	Y	D	G	L	I	P	G	Q	E	S	L	K	V	H	A	C	V	G	L	P	L	F	.	A	G	Q	N	L	I	G	A	L	T	L	.	D	G	M	Q	P	D	Q	F	D	V	F	S	D	E	E	L	R	L	I	A	A	L	A	A	G	A	L	S	N	A	L	L
Query Conservation																																					.												.
Alig confidence		.	.	.	.	.	.																														.												.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	L	A	D	P	L	A	I	G	P	Q	W	L	E	R	P	G	T	H	L	P	C	V	L	L	L	P	L	R	G	A	D	E	G	S	F	G	T	L	V	L	A	N	S	V	A	I	S	A	P	D	G	E	D	I	E	S	L	Q	L	L	A	T	L	L	A	A	H	L	E	N	N	R	L
Template Known Secondary structure		.	.	.	.	.	.	T				T	T			S							T	T	S	S	S											S	S	S	S		S								S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions