Job Description P37013 Confidence 98.90% Date Thu Jan 5 11:54:23 GMT 2012 Rank 119 Aligned Residues 218 % Identity 19% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																	.	.																						.	.	.	.	.	.
Query SS confidence																																	.	.																						.	.	.	.	.	.
Query Sequence		E	A	V	K	Q	T	Q	M	I	G	L	S	P	G	M	T	Q	L	K	K	E	I	E	I	V	A	A	S	D	L	N	.	.	V	L	I	S	G	E	T	G	T	G	K	E	L	V	A	K	A	I	H	E	A	.	.	.	.	.	.	S	P	R	A	V	N	P	L	V	Y	L	N	C	A	A	L	P	E	S	V
Query Conservation																																	.	.																						.	.	.	.	.	.
Alig confidence																																	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	Y	V	P	D	V	L	P	H	R	E	A	E	L	R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H	R	E	T	P	Y
Template Known Secondary structure		T	T				S			T	T											T	T	G	G	G	T	S	S										B		T	T	S	S																				T										T	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.										.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																			.
Query SS confidence																								.	.	.	.	.	.	.	.	.																			.
Query Sequence		A	E	S	E	L	F	G	H	V	K	G	A	F	T	G	A	I	S	N	R	S	G	.	.	.	.	.	.	.	.	.	K	F	E	M	A	D	N	G	T	L	F	L	D	E	I	G	E	L	.	S	L	A	L	Q	A	K	L	L	R	V	L	Q	Y	G	D	I	Q	R	V	G	D	D	R	C	L	R	V	D	V
Query Conservation																								.	.	.	.	.	.	.	.	.																			.
Alig confidence																								.	.	.	.	.	.	.	.	.																			.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	A	S	A	I	A	E	A	V	G	V	R	V	P	F	T	G	L	S	V	G	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	.	.	.	.	.	.	.	.	.	.	I	N	Q	E	L	V
Template Known Secondary structure												S					S	S																T	T	S		S								T	T	T					S	T	T											.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		R	V	L	A	A	T	N	R	D	L	R	E	E	V	L	A	G	R	F	R	A	D	L	F	H	R	L	S	V	F	P	L	S	V	P	P	L	R	E	R	G	D	D	V	I	L	L	A	G	Y	F	C	E	Q	C	R	L	R	Q	G	L	S	R	V	V	L	S	A	G	A	R	N	L	L	.	.	Q	H	Y	S
Query Conservation																																																																												.	.
Alig confidence													.	.	.	.																									.	.																.	.	.	.	.														.	.
Template Conservation													.	.	.	.																									.	.																.	.	.	.	.
Template Sequence		S	L	V	G	I	T	N	S	L	G	F	.	.	.	.	V	E	N	L	E	P	R	V	K	S	S	L	G	E	V	E	L	V	F	P	P	Y	T	A	.	.	P	Q	L	R	D	I	L	E	T	R	A	E	E	A	F	.	.	.	.	.	N	P	G	V	L	D	P	D	V	V	P	L	C	A	A	L	A	A	R
Template Known Secondary structure								S		S	T	T	.	.	.	.	S	S	S	S						T	T	T	T	S					B						.	.															B	.	.	.	.	.		T	T	T	B		S	S											S
Template Predicted Secondary structure													.	.	.	.																									.	.																.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	G	N	V	R	E	L	E	H	A	I	H	R	A	V	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	G	D	A	R	R	A	L	D	L	L	R	V	A	G	E	I	A
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions