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Job DescriptionP37013
Confidence98.90%DateThu Jan 5 11:54:23 GMT 2012
Rank118Aligned Residues197
% Identity17%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.... .....210.........220.........230.........240.........250........
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Query Sequence  KQTQMIGLSPGMTQLKKEIEIV. . . . AASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFG
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Template Sequence  SFKDVAGMHEAKLEVREFVDYLKSPEAKVPKGALLLGPPGCGKTLLAKAV. . . ATEAQVPFLAMAGAE. . . . . . . . . FVE
Template Known Secondary structure 
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TTSS...T

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   307..310.........320.........330.........340.........350...... ...360.........370. ...
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  HVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAG
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Template Sequence  VIGGLGAARVRSLFKEARARAPCIVYIDEIEQTLNQLLVEMDGMGTTDHV. . . . . . . . . . . . IVLASTNRADILDGALMR
Template Known Secondary structure  SSTTT
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GGGGGSGGGS
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   381........390.........400.........410.........420.........430 .........440........
 
   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  RFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLA
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Template Sequence  PGRLD. . . . . . . RHVFIDLPT. . LQERREIFEQHLKSL. . . . . . KLTQSSTFYSQRLAELTPGFSGADIANICNEAALHV
Template Known Secondary structure  TTS

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   468.470.. .......480. ........490...... ...500.........510.........520.........530..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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