Job Description P37013 Confidence 99.47% Date Thu Jan 5 11:54:23 GMT 2012 Rank 58 Aligned Residues 146 % Identity 12% Template c2qybA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:membrane protein, putative; PDBTitle: crystal structure of the gaf domain region of putative membrane2 protein from geobacter sulfurreducens pca Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		A	I	E	L	Q	R	G	I	G	H	Q	D	R	F	Q	R	L	I	T	T	L	R	Q	V	L	E	C	D	A	S	A	L	L	R	Y	D	S	R	Q	.	.	F	I	P	L	A	I	D	G	L	A	K	D	V	L	G	R	R	F	A	L	E	G	H	P	R	L	E	A	I	A	R	A	G	D	V	V	R	F	P
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		S	E	I	X	N	R	T	L	D	L	Q	I	I	X	D	D	L	L	N	L	L	L	K	E	F	K	L	D	L	A	V	I	R	L	V	D	E	K	G	V	L	R	V	R	S	Y	S	G	K	G	I	A	G	I	A	G	K	D	W	E	P	E	I	E	T	Y	I	G	E	A	F	L	S	N	R	L	Q	F	V	N
Template Known Secondary structure																										S	S		S									T	T	S										S		T	T	S	T	T		S		B				T	T	S									T	S					S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.												.
Query SS confidence																																				.												.
Query Sequence		A	D	S	E	L	P	D	P	Y	D	G	L	I	P	G	Q	E	S	L	K	V	H	A	C	V	G	L	P	L	F	A	G	Q	N	.	L	I	G	A	L	T	L	D	G	M	Q	.	P	D	Q	F	D	V	F	S	D	E	E	L	R	L	I	A	A	L	A	A	G	A	L	S	N
Query Conservation																																				.												.
Alig confidence													.	.																						.												.
Template Conservation													.	.
Template Sequence		D	T	Q	Y	X	T	K	P	L	T	R	.	.	E	L	X	Q	K	E	G	I	K	S	F	A	H	I	P	I	S	R	K	G	E	P	P	F	G	I	L	S	V	F	S	R	T	I	V	G	L	F	N	E	P	F	L	N	L	L	E	S	L	A	G	Q	L	A	Q	A	V	K	I
Template Known Secondary structure			G	G	G		S						.	.						T	T												T	T	S											S	S		S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions